| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 163 | = 8564 | 0 (0.000) | 51 (0.990) +CGGTCATTACCGCCG |
45/170 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 72 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTAAAGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 163/8467‑8564‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGTAACCAGCGA > 72/1‑99 ||||||||||||||| GTAAAGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGG < 1:1548128/101‑1GTAAAGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGAACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGG > 1:229511/1‑101 AAAGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTC > 1:20022/1‑101 AAAGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTC > 1:69611/1‑101 AGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCAT < 1:1115166/101‑1 CCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTAC < 1:983053/101‑1 CCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTAC < 1:1652403/101‑1 GGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCG < 2:1440408/101‑1 GAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGC < 1:1480160/101‑1 TTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCC > 1:1111897/1‑101 ATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAA > 1:872665/1‑101 TCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAA < 2:1474942/101‑1 CTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAAC < 1:450939/101‑1 GTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCT < 1:1405607/101‑1 GTGGTAGGATTTTCAGCCCCATCCGCCAGAACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCT > 1:1633417/1‑101 GGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGC > 1:1489174/1‑101 GGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGC > 1:1471625/1‑101 GTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCC > 1:1260631/1‑101 TAGGATTTTCAGCCCCATCCGCCAGAACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCG > 1:1453733/1‑101 ATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATA > 2:779546/1‑101 ATTTTCAGCCCCATCCGCCAGAACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATA > 1:1187822/1‑101 TTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAG < 2:805732/101‑1 TTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAG < 2:1084557/101‑1 TTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGT < 1:222130/101‑1 TTCAGCCCCATCCGCCAGAACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAAATCTGCCGGATAGTG > 2:174508/1‑101 TCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGC < 1:389816/101‑1 CAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCG > 1:414896/1‑101 AGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTTTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGC < 2:1111892/101‑1 AGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGC > 1:228843/1‑101 AGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGC > 2:1372758/1‑101 CCCCATCCGCAAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTT < 1:620640/101‑1 CCCCTCCCCCAGCCCTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTT < 1:101346/101‑1 CCCATCCGCCAGGACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTT > 1:932152/1‑101 CCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTC > 2:1124739/1‑101 CATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCA < 1:558397/101‑1 cGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTCCCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAAC < 2:20022/100‑1 CACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGT < 1:444775/101‑1 CACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGT > 1:366231/1‑101 CTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTT > 1:1402242/1‑101 CCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATAT < 2:69611/101‑1 CAGGCCCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACA < 2:552143/101‑1 CCACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAA > 1:174812/1‑101 CACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAG < 1:1464508/101‑1 CACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAG < 1:1341247/101‑1 ACCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGC > 2:1125872/1‑101 CCACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCA < 2:228843/101‑1 ACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATA < 1:850641/101‑1 ACCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATA > 1:1303570/1‑101 ctttccggtgGTTGTCCAGACCGGCGGTCATTACGGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAG < 2:218670/91‑1 CCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAG > 1:199950/1‑101 CCTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAG < 2:1576409/101‑1 CTTCTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGG < 2:1633411/101‑1 CTCGGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCG > 1:1037313/1‑101 GGTGTTGTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAG > 1:10565/1‑101 GGTGTTGTCCATATCGGCGGTCATTACCCCCGCCATAAACTCTGCCAGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAG < 2:524613/101‑1 GTCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCG > 1:1601032/1‑101 TCCATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGA > 1:92664/1‑101 CATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATT > 2:1522354/1‑101 ATATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTT > 2:1558284/1‑101 TATCGGCGGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTG < 2:229511/101‑1 gacgaTCATGACCGCCGTCATAACCTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACTCCAAAGCATAGGCCGCAGAGTGCGATTTGTTAA < 1:1125877/96‑1 CGGTCATTCCCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAAT < 2:1534422/101‑1 GGTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATC > 1:1143505/1‑101 gaCATTCCCCCCGCCATAAGCTCTGCCGGATAGTGCACTTTCAGCCATAACGTTTGATACGGCACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCC < 2:78121/99‑1 GTCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCC < 2:1671649/101‑1 TCATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCG > 2:440850/1‑101 CATTCCCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGT < 2:932147/101‑1 ATTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGTA > 1:985744/1‑101 TTACCGCCGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGTAA < 2:1105611/101‑1 CGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGTAACCAGCGA < 1:1189179/101‑1 CGCCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGTAACCAGCGA < 2:1513883/101‑1 ||||||||||||||| GTAAAGACCGGAGTTTATATCTGGTGGTAGGATTTTCAGCCCCATCCGCCAGCACTCATCCACCAGGCCCACCACCTTCTCGGTGTTGTCCATATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 163/8467‑8564‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCATAAACTCTGCCGGATAGTGCGCTTTCAGCCATAACGTTTGATATGACACCAAAGCATAGGCCGCAGAGTGCGATTTGTTAAATCCGTAACCAGCGA > 72/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |