New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 16 47371 =52 (0.740)58 (0.830) 54/200 0.3 52.5% intergenic (–/–) –/– –/–
?16 = 47452 53 (0.760)intergenic (–/–) –/– –/–

GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  16/47470‑47371
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT  <  16/47452‑47353
                                                                                                                                                                                                        
GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCA                                                                                                     <  1:1085242/101‑1
GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCA                                                                                                     <  1:457689/101‑1
    TGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCC                                                                                                 <  2:180979/101‑1
      CACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGT                                                                                               >  1:595000/1‑101
       ACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTA                                                                                              >  2:1677056/1‑101
        CGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTAC                                                                                             <  1:1260172/101‑1
        CGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTAC                                                                                             >  2:1714360/1‑101
          AAGCAGAGATTCCGTACAACCGGTGCGCTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAA                                                                                           <  1:265107/101‑1
            GCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACC                                                                                         >  2:120091/1‑101
            GCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACC                                                                                         <  1:1686888/101‑1
             CAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCG                                                                                        >  2:1656770/1‑101
              AGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGG                                                                                       >  2:662053/1‑101
               GAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGT                                                                                      >  1:414395/1‑101
                   TTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCAC                                                                                  <  2:777262/101‑1
                      CGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCC                                                                               <  1:1137640/101‑1
                         ACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGGACTCCTGC                                                                            >  1:9259/1‑101
                         ACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGC                                                                            <  2:130028/101‑1
                          CAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCG                                                                           <  2:849857/101‑1
                                 TGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAAT                                                                    <  1:138542/101‑1
                                      TCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGA                                                               >  1:1320093/1‑101
                                           CGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACT                                                          >  2:156796/1‑101
                                             CGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGG                                                        <  2:140255/101‑1
                                             CGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGG                                                        <  2:618579/101‑1
                                             CGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTCCGCGCCAATCCAGATAACTGG                                                        >  2:231969/1‑101
                                              GCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGC                                                       >  1:1481031/1‑101
                                               CCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCG                                                      <  2:894000/101‑1
                                                CAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGG                                                     >  1:1131842/1‑101
                                                 AATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGA                                                    >  1:633442/1‑101
                                                  ATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGAC                                                   <  1:517989/101‑1
                                                    CCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGC                                                 <  1:58913/101‑1
                                                    CCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGC                                                 >  1:1640637/1‑101
                                                     CAGATAACTGGCGGACGCTGCGGTTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCT                                                <  2:1029523/101‑1
                                                     CAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCT                                                >  1:224174/1‑101
                                                       GATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGC                                              <  1:1714366/101‑1
                                                       GATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGGACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGC                                              >  2:251315/1‑101
                                                         TAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGTCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGG                                            <  1:1463923/101‑1
                                                             TGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTA                                        <  2:524890/101‑1
                                                              cGCGGACCCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAG                                       <  2:829133/100‑1
                                                               GCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGT                                      <  1:1196136/101‑1
                                                                 GGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAA                                    <  1:1174336/101‑1
                                                                  GACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAAC                                   <  2:431012/101‑1
                                                                       TGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATT                              <  1:1413901/101‑1
                                                                        GCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTC                             <  1:1189072/101‑1
                                                                         CGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCG                            >  1:1170888/1‑101
                                                                         CGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCG                            <  2:873176/101‑1
                                                                          tgtTTAGTACCCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGG                           <  2:1322413/98‑1
                                                                             TTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGACA                        >  1:229646/1‑101
                                                                              TAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCAT                       <  1:1459427/101‑1
                                                                               AGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATC                      >  1:1503010/1‑101
                                                                                GTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCT                     <  1:70178/101‑1
                                                                                GTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCT                     >  2:1439579/1‑101
                                                                                         TCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGG            <  2:1009226/101‑1
                                                                                             CCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTT        >  2:203285/1‑101
                                                                                               ATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGC      >  2:136168/1‑101
                                                                                                  TCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTAC   <  1:930006/101‑1
                                                                                                   CATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT  >  1:164831/1‑101
                                                                                                   CATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT  >  1:990602/1‑101
                                                                                                   CATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT  >  1:258075/1‑101
                                                                                                                                                                                                        
GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  16/47470‑47371
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT  <  16/47452‑47353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.