New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 16 | 47371 = | 52 (0.740) | 58 (0.830) | 54/200 | 0.3 | 52.5% | intergenic (–/–) | –/– | –/– |
? | 16 | = 47452 | 53 (0.760) | intergenic (–/–) | –/– | –/– |
GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 16/47470‑47371 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT < 16/47452‑47353 GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCA < 1:1085242/101‑1 GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCA < 1:457689/101‑1 TGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCC < 2:180979/101‑1 CACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGT > 1:595000/1‑101 ACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTA > 2:1677056/1‑101 CGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTAC < 1:1260172/101‑1 CGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTAC > 2:1714360/1‑101 AAGCAGAGATTCCGTACAACCGGTGCGCTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAA < 1:265107/101‑1 GCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACC > 2:120091/1‑101 GCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACC < 1:1686888/101‑1 CAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCG > 2:1656770/1‑101 AGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGG > 2:662053/1‑101 GAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGT > 1:414395/1‑101 TTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCAC < 2:777262/101‑1 CGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCC < 1:1137640/101‑1 ACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGGACTCCTGC > 1:9259/1‑101 ACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGC < 2:130028/101‑1 CAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCG < 2:849857/101‑1 TGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAAT < 1:138542/101‑1 TCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGA > 1:1320093/1‑101 CGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACT > 2:156796/1‑101 CGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGG < 2:140255/101‑1 CGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGG < 2:618579/101‑1 CGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTCCGCGCCAATCCAGATAACTGG > 2:231969/1‑101 GCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGC > 1:1481031/1‑101 CCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCG < 2:894000/101‑1 CAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGG > 1:1131842/1‑101 AATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGA > 1:633442/1‑101 ATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGAC < 1:517989/101‑1 CCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGC < 1:58913/101‑1 CCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGC > 1:1640637/1‑101 CAGATAACTGGCGGACGCTGCGGTTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCT < 2:1029523/101‑1 CAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCT > 1:224174/1‑101 GATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGC < 1:1714366/101‑1 GATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGGACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGC > 2:251315/1‑101 TAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGTCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGG < 1:1463923/101‑1 TGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTA < 2:524890/101‑1 cGCGGACCCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAG < 2:829133/100‑1 GCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGT < 1:1196136/101‑1 GGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAA < 1:1174336/101‑1 GACGCTGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAAC < 2:431012/101‑1 TGCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATT < 1:1413901/101‑1 GCGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTC < 1:1189072/101‑1 CGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCG > 1:1170888/1‑101 CGGGTTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCG < 2:873176/101‑1 tgtTTAGTACCCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGG < 2:1322413/98‑1 TTAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGACA > 1:229646/1‑101 TAGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCAT < 1:1459427/101‑1 AGTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATC > 1:1503010/1‑101 GTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCT < 1:70178/101‑1 GTAACCGATTCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCT > 2:1439579/1‑101 TCGGCCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGG < 2:1009226/101‑1 CCATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTT > 2:203285/1‑101 ATCTCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGC > 2:136168/1‑101 TCATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTAC < 1:930006/101‑1 CATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT > 1:164831/1‑101 CATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT > 1:990602/1‑101 CATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT > 1:258075/1‑101 GCGTTGCACGAAGCAGAGATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 16/47470‑47371 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCCGTACAACCGGTGCACTCCTGCGCGCCAATCCAGATAACTGGCGGACGCTGCGGGTTAGTAACCGATTCGGCCATCTCTGCAGCGGCTTTGCTACT < 16/47452‑47353 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |