New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	153	= 9595	39 (0.610)	28 (0.460)	23/200	2.3	59.0%	intergenic (–/–)	–/–	–/–
	?	174	1 =	0 (0.000)					intergenic (–/–)	–/–	–/–

ATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  153/9543‑9595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACA  >  174/1‑99                                                                                                                                                          atcCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACA                                                     >  2:1402098/4‑101   cCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAAC                                                   >  2:924890/2‑101   cCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAAC                                                   <  2:1342430/100‑1         aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCC                                             >  1:1576982/2‑101         aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCC                                             <  2:851330/100‑1          CCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCG                                            <  1:966532/101‑1           CGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGA                                           >  1:1563893/1‑101           CGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGA                                           <  2:1485653/101‑1            GATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGAC                                          >  1:1174499/1‑101             ATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACC                                         >  2:1384113/1‑101              TGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCC                                        <  2:1326066/101‑1               GCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCT                                       <  2:1118538/101‑1                CCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTA                                      <  1:1648441/101‑1                     TGCGCCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAAT                                 <  2:744961/101‑1                         cCGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATA                             >  1:435107/2‑101                          CGCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAA                            <  1:927589/101‑1                           GCTGACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAAC                           <  1:1199389/101‑1                              GACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAAT                        <  1:817829/101‑1                               ACGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATG                       <  2:1512863/101‑1                                CGCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGA                      <  2:1312654/101‑1                                 GCGACTTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGAC                     <  2:1514465/101‑1                                      TTATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGA                <  1:1347446/101‑1                                       TATCAGGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGAC               <  1:957449/101‑1                                            GGCCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACAT          <  1:605700/101‑1                                              CCTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATaa        >  2:486552/1‑99                                               CTACGGGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAG       >  1:721915/1‑101                                                  cggGATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGA    >  2:516914/4‑101                                                    gGATGTACTGAACTGTAGGTGGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACA  <  2:163637/100‑1                                                                                                                                                          ATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  153/9543‑9595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGTACTGAACTGTAGGTCGGATAAGACGCCTGGCGTCGCATCCGACAACAATCCCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACA  >  174/1‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.