| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 152 | = 2097 | 36 (0.560) | 43 (0.840) | 32/166 | 0.7 | 74.2% | intergenic (–/–) | –/– | –/– |
| ? | 209 | 18 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 152/1983‑2097‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacgccgcatccggcaGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCT > 209/18‑117 GTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCA > 1:958230/1‑101GTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCA > 2:746840/1‑101GTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCA < 2:1671525/101‑1 TAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAC < 2:1264036/101‑1 TAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAC < 1:1644982/101‑1 AAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACG > 1:768571/1‑101 ACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCC > 2:418956/1‑101 AGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCAT < 1:1024383/101‑1 AGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCAT > 2:1681346/1‑101 AGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCAT > 1:1579325/1‑101 GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATC < 1:1032948/101‑1 ATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCC > 2:251535/1‑101 AAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGG < 1:129402/101‑1 AGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGC > 1:1063817/1‑101 GTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTC > 1:575935/1‑101 GTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTC > 2:1104845/1‑101 CGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTG > 1:441850/1‑101 CGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTG < 2:755976/101‑1 TGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTAT < 2:479595/101‑1 GCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATT < 2:441845/101‑1 CCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTA < 1:1162160/101‑1 CCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTA > 1:1154663/1‑101 GACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCA > 2:202735/1‑101 GACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCA > 1:1298816/1‑101 GACGCTTTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCA < 2:1525268/101‑1 gcttgGCGCGTCTTATCAGGCCTACGGTTTGCGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATAT < 1:1681352/96‑1 tTGCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCA < 1:757097/100‑1 GCGCGTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGT < 1:1079551/101‑1 GTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTAT > 2:915095/1‑101 GTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTAT > 2:1507446/1‑101 GTCTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTAT > 2:596196/1‑101 CTTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTG > 1:253120/1‑101 TTATCAGGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGG < 1:230040/101‑1 GGCCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGT < 2:575930/101‑1 CCTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAG > 1:509285/1‑101 CTACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGG > 2:755505/1‑101 TACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGC > 1:128570/1‑101 TACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGC < 2:618472/101‑1 ACGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCA < 2:38390/101‑1 CGGTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCTTCATCCGGCAGTCGTGCACTATTATCAACGCATATTCCGTTTATTGGCGTGGTAGGCAA < 2:27707/101‑1 GTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATA < 2:483914/101‑1 GTTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATA < 1:620254/101‑1 TTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATAT < 2:466522/101‑1 acGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCT > 1:113667/3‑101 cGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTC < 2:1063812/100‑1 GCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTCTCCACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCC > 1:70036/1‑101 CGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCA > 2:1613051/1‑101 CCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGA > 1:1428486/1‑101 CCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGA > 2:164727/1‑101 AAGGCGTTCACGCCGCATCCGGTAGTCGTCCTCTTTTATCAACGCATATTCAGTTTATTGGCGTGGATGGCAATATGCCGGCCAATAAACCTGGAGACAAt > 2:922677/1‑100 AAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAA > 2:907577/1‑101 AAGGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAA > 1:877919/1‑101 AAGGCGTTCACGCCGCATCCGGCAGTCGCGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAA > 1:543586/1‑101 GGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAAT < 2:1240945/101‑1 GGCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAAT < 2:463167/101‑1 GCGTTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATA > 1:1254865/1‑101 cgatctCGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAA < 2:891790/95‑1 TTCACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATA < 1:947870/101‑1 CACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGC > 1:1063832/1‑101 CACGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGC > 1:741565/1‑101 CGCCGCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAAagatcg > 1:891795/1‑95 GCATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGAT > 2:312588/1‑101 CATCCGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATC > 1:1460937/1‑101 CGGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAA > 1:365971/1‑101 GGCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAC < 1:1113486/101‑1 GCAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACC > 2:1572739/1‑101 CAGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCC > 2:1384464/1‑101 AGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCT < 2:877914/101‑1 AGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCT > 1:1715977/1‑101 AGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCT < 1:1567400/101‑1 GTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 152/1983‑2097‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacgccgcatccggcaGTCGTGCACTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCT > 209/18‑117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |