New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 137 | = 12181 | 0 (0.000) | 30 (0.460) | 23/200 | 2.4 | 100% | intergenic (–/–) | –/– | –/– |
? | 210 | 2886 = | NA (NA) | intergenic (–/–) | –/– | –/– |
CGAAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 137/12085‑12181 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCT‑‑‑‑ > 210/2886‑2923 CGAAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTT < 1:657284/101‑1 GAAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTA < 1:186126/101‑1 AAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTAT > 2:1527731/1‑101 AAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTAT < 1:648615/101‑1 CGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGG > 2:144246/1‑101 GTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGA > 2:678707/1‑101 TTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGAT < 2:1298255/101‑1 GTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCG > 1:1014451/1‑101 GTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCG < 2:1389027/101‑1 TATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGG > 1:888613/1‑101 TATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGG > 1:1201112/1‑101 ATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGC < 1:1540398/101‑1 TAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCG > 2:489810/1‑101 AAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGGCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGT < 1:164044/101‑1 AAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTG > 2:1600295/1‑101 ATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAAg > 2:1255399/1‑100 ATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAAC > 2:1176652/1‑101 ATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAAC > 1:1595771/1‑101 ATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAAC > 1:759704/1‑101 TATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACG > 2:929981/1‑101 ATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGC > 1:510087/1‑101 TACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTT < 2:901705/101‑1 AGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCC < 2:1189796/101‑1 AACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCTGCGTGAACGCCTTATCCGG > 1:71849/1‑101 AACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGG > 2:1426172/1‑101 CAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGTCAAACAGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCC > 2:963468/1‑101 AATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCT > 1:1693643/1‑101 ATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa < 1:1664005/101‑2 TTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTac > 1:326975/1‑99 AGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTacaa < 2:510082/101‑5 CGAAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAGTCAAAAAGAAACCCCGGCATATGGCCGGGGTTTCAGATTATTGACAAAGTGCGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 137/12085‑12181 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCT‑‑‑‑ > 210/2886‑2923 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |