| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 134 | 1 = | 0 (0.000) | 54 (0.930) | 47/200 | 0.0 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 51 | = 15566 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AAGCTCATCAGCCTGATGAATATCTGGAGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 134/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAAGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATCCGACCTA < 51/15566‑15468 AAGCTCATCAGCCTGATGAATATCTGGAGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTA > 2:364445/1‑101AAGCTCATCAGCCTGATGAATATCTGGAGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTA < 2:1612833/101‑1 AATATCTGGAGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCG > 1:1276861/1‑101 ATCTGGAGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGC > 1:285396/1‑101 AGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATC > 1:363509/1‑101 GACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCC < 1:1459908/101‑1 ACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCG > 1:930527/1‑101 TTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCG > 2:974651/1‑101 TATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTT > 1:325444/1‑101 TATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTT < 1:1243417/101‑1 ATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTG > 1:1169863/1‑101 ATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTG > 1:1577669/1‑101 TTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGC > 1:912895/1‑101 TAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCC < 1:560897/101‑1 AAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCA > 2:549332/1‑101 AAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCA < 1:810819/101‑1 AACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAA > 1:569410/1‑101 CCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAAC > 2:1231584/1‑101 CCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAAC < 2:853982/101‑1 CCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACT > 1:721424/1‑101 CCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTG > 1:1414812/1‑101 TGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGC > 1:261489/1‑101 GAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCC > 1:870010/1‑101 AGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCG < 2:1155330/101‑1 GTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGC > 1:1367049/1‑101 TTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCA < 1:829724/101‑1 TGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAA > 1:112606/1‑101 TGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAA > 2:935080/1‑101 ATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATA > 2:628742/1‑101 TTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAA > 2:942066/1‑101 TATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAAT < 1:396934/101‑1 TATCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAAT < 2:1472331/101‑1 TCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACACCTGTGCCGCAATAATGT > 1:953736/1‑101 TCCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAAGCCGGATAAGGCGCTCGCCCCGCATCCCGCACCGTTGCCAAACTCCTGTGCCGCAATAATGT > 1:1187234/1‑101 CCAGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTC < 2:1365971/101‑1 AGGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGG < 1:1172752/101‑1 GGTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGA > 1:315078/1‑101 GTAATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGAT < 2:1148283/101‑1 ATTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCG > 1:939807/1‑101 TTCACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGA < 1:364445/101‑1 ACCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGC < 1:734737/101‑1 CCATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCT < 2:912890/101‑1 CATTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTT < 2:1367043/101‑1 TTTTTGCTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGC > 1:181240/1‑101 CTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCT > 2:929622/1‑101 CTGGCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCT > 2:701295/1‑101 GCATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTAT < 2:839361/101‑1 CATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATC > 2:1465974/1‑101 CATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATC > 2:1067426/1‑101 ATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATCC > 2:362484/1‑101 ATTAAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGAGATGCTTGCGCATCTTATCC > 1:59429/1‑101 AAAACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATCCGAC > 2:1093430/1‑101 AACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATCCGACCT > 2:353710/1‑101 ACGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATCCGACCTA < 2:363509/101‑1 AAGCTCATCAGCCTGATGAATATCTGGAGACGCGGTTTATTAAACCCACCCGTGAGTTGATTATCCAGGTAATTCACCATTTTTGCTGGCATTAAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 134/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAAGCCGGATAAGGCGCTCGCGCCGCATCCGGCACCGTTGCCAAACTCCTGTGCCGCAATAATGTCGGATGCGATGCTTGCGCATCTTATCCGACCTA < 51/15566‑15468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |