New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 13 11 =0 (0.000)61 (1.000) 45/184 0.2 100% intergenic (–/–) –/– –/–
?156 = 9517 0 (0.000)intergenic (–/–) –/– –/–

ATGACGGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCCCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  13/116‑11
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgccgTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAAT  <  156/9517‑9418
                                                                                                                                                                                                              
ATGACGGGGCTGGCGTGTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCac                                                                                                           <  2:1609056/101‑3
ATGACGGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCac                                                                                                           >  2:1577570/1‑99
ATGACGGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGCGCGTCGTTTCTGATGCCCGCCATCac                                                                                                           >  2:841885/1‑99
     GGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCG                                                                                                      >  2:193089/1‑101
       GGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTG                                                                                                    <  2:946330/101‑1
       GGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTG                                                                                                    <  1:318221/101‑1
             CGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTT                                                                                              <  1:468009/101‑1
              GTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTG                                                                                             >  2:962226/1‑101
                  GCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGG                                                                                         >  1:1269505/1‑101
                   CGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGT                                                                                        <  2:1336270/101‑1
                   CGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGT                                                                                        >  1:57914/1‑101
                    GGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTG                                                                                       >  2:74956/1‑101
                          CGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATA                                                                                 <  2:1175551/101‑1
                            CTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATT                                                                               >  2:1109404/1‑101
                            CTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATT                                                                               >  1:509860/1‑101
                            CTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATT                                                                               >  2:1656251/1‑101
                               TGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTAT                                                                            <  2:1419348/101‑1
                                GCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATG                                                                           >  1:297371/1‑101
                                GCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATG                                                                           <  1:27479/101‑1
                                 CTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGG                                                                          <  1:1250369/101‑1
                                    CTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGG                                                                       >  2:121456/1‑101
                                     TGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGT                                                                      >  2:464079/1‑101
                                     TGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGT                                                                      >  1:1377869/1‑101
                                      GGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTT                                                                     <  2:1066820/101‑1
                                         ATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCG                                                                  <  1:1505792/101‑1
                                         ATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCG                                                                  >  1:608097/1‑101
                                           CGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGT                                                                >  2:1007146/1‑101
                                           CGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGT                                                                <  2:815703/101‑1
                                                   GGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTAT                                                        <  2:1269500/101‑1
                                                   GGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTAT                                                        >  2:234078/1‑101
                                                    GTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATC                                                       <  1:96677/101‑1
                                                        AGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCA                                                   <  1:591396/101‑1
                                                          CACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACC                                                 >  1:1439174/1‑101
                                                             GTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCGAATATTTATGTTGGTTCCGGCTCCATTTTCGGCACCTCC                                              >  2:819413/1‑101
                                                             GTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCC                                              >  1:387332/1‑101
                                                             GTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCC                                              >  2:1566590/1‑101
                                                               TCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCAT                                            >  2:51181/1‑101
                                                                CCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATT                                           >  2:709051/1‑101
                                                                 CGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTG                                          >  1:360954/1‑101
                                                                 CGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTG                                          <  2:648321/101‑1
                                                                 CGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGATTCCGGTTCCATTATCGGCACCGCCATTG                                          <  2:1517893/101‑1
                                                                   tTCTCGGTGCGTCGTTTCTGATGCCCGCCATCCCCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCG                                        <  2:717859/100‑1
                                                                   ATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCG                                        <  2:1296217/101‑1
                                                                        GGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTT                                   <  1:1656257/101‑1
                                                                         gcGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTA                                  <  1:841890/99‑1
                                                                         GTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTA                                  >  1:891622/1‑101
                                                                           GCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATT                                <  2:28767/101‑1
                                                                            CGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTA                               <  1:496798/101‑1
                                                                             GTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGCTCCATTATCGGCACCGCCATTGCGGTTTTATTAG                              >  1:814219/1‑101
                                                                                GTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGG                           <  2:73061/101‑1
                                                                                GTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGG                           >  1:1033345/1‑101
                                                                                    CTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATA                       >  1:107164/1‑101
                                                                                     TGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATAT                      <  1:1118561/101‑1
                                                                                      GATGCCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATT                     <  2:297371/101‑1
                                                                                          CCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCt                 >  2:1352719/1‑100
                                                                                          CCCGCCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCA                 >  2:257603/1‑101
                                                                                           gtcaCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAA                >  2:679403/5‑101
                                                                                              CCATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAA             <  2:55752/101‑1
                                                                                               CATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAG            >  2:1109779/1‑101
                                                                                                ATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGG           <  2:489874/101‑1
                                                                                                ATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGG           >  1:23491/1‑101
                                                                                                ATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGG           >  1:1623410/1‑101
                                                                                                ATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGG           <  1:1007151/101‑1
                                                                                                ATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGG           >  2:908648/1‑101
                                                                                                ATCACCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGG           <  1:257603/101‑1
                                                                                                  caCCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTT         <  2:1247422/99‑1
                                                                                                    CCGCCGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTG       <  2:387327/101‑1
                                                                                                        CGTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAA   <  2:23491/101‑1
                                                                                                         GTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAAT  <  1:234078/101‑1
                                                                                                         GTGGTGCTTGAAGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAAT  >  2:777348/1‑101
                                                                                                                                                                                                              
ATGACGGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCCCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  13/116‑11
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgccgTGGTGCTTGGCGGTGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAAT  <  156/9517‑9418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.