| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 124 | 1 = | 0 (0.000) | 27 (0.500) +AACGCCTTATC |
20/178 | 2.4 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 66 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGGCACCGAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 124/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATCACAAACC > 66/1‑98 ||||||||||| GGGCACCGAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAAC < 1:518328/101‑1GGGCACCGAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAAC < 2:1674565/101‑1 GGCACCGAATTTCTCCTGCAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAcgc > 1:1208251/1‑98 CCGAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTT < 2:935089/101‑1 CCGAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTT > 2:594399/1‑101 GAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTAT > 2:298592/1‑101 AATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATC > 1:1557299/1‑101 ATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCC > 2:236487/1‑101 TTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGC > 1:488839/1‑101 aaaagggaAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGTCGTAAACGCCTTATCGGCC > 2:227001/9‑101 TCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCC < 1:736964/101‑1 TCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCT > 2:1183789/1‑101 TCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCT < 2:381359/101‑1 GGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAT < 2:1458806/101‑1 AGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGT < 1:470027/101‑1 GTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTG > 2:115220/1‑101 CCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAA > 1:1383531/1‑101 CATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCtc > 2:682168/1‑99 GTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATA < 1:1709734/101‑1 TATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAC > 1:338302/1‑101 ACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGG < 2:858268/101‑1 CGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGC > 2:1476242/1‑101 GATTTTTTCCGTAAGCAATAATTTGCAACTGCTCGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAACACGCGGCA < 2:1704568/101‑1 ATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAA > 1:165866/1‑101 ATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAA > 1:609650/1‑101 CCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGC < 1:1429642/101‑1 CGTAAGCAATAATTTGCAACTCCTGGCGGATCGGGCGT‑AACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCAT < 2:1208246/101‑1 TAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATC > 1:962847/1‑101 AATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCa < 1:1595742/101‑2 AATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaact < 2:492125/101‑5 ATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaactg > 1:1189725/1‑96 TGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaactgcac > 2:819856/1‑93 CAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaactgcaccg > 1:1019356/1‑91 CAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaactgcaccg < 1:944284/101‑11 AACGCCTTATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCAT < 2:1557293/101‑1 ACGCCTTATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATC < 2:1207580/101‑1 nCCTTATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATCAC > 1:443526/2‑101 CCTTATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATCGCA < 1:481363/101‑1 TTATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATCACAAA < 2:408619/101‑1 ATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATCACAAACC > 2:965974/1‑101 ||||||||||| GGGCACCGAATTTCTCCTGGAGTGCCGCGCATTTGTTTATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 124/98‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCCTACATGTGCAATCCCCCAGGCCGGATAAAACACGGCAAGCGTCGCATCCGGCGTTACCACCGGGCGTATTCTTTTTGAATCCCATCACAAACC > 66/1‑98 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |