New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 119 1 =0 (0.000)28 (0.510) 16/188 2.7 50.0% intergenic (–/–) –/– –/–
?91 = 8419 56 (0.970)intergenic (–/–) –/– –/–

TGTGGCGGTAATTAGTGACACTATGACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  119/106‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGC  <  91/8419‑8356
                                                                                                                                                                          
TGTGGCGGTAATTAGTGACACTATGACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTT                                                                       <  2:950862/101‑1
   GGCGGTAATTAGTGACACTATGACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCC                                                                    <  2:741034/101‑1
   GGCGGTAATTAGTGACACTATGACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCC                                                                    <  1:1488199/101‑1
                                GACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCT                                       <  1:1563139/101‑1
                                 ACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA                                      >  2:311990/1‑101
                                 ACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA                                      >  1:574524/1‑101
                                     CTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAA                                  <  2:650367/101‑1
                                     CTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAA                                  <  1:1445568/101‑1
                                      TGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAA                                 >  1:772363/1‑101
                                      TGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAA                                 <  1:461715/101‑1
                                            TCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAtcgctt                           >  1:1405161/1‑95
                                            TCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAtcgctt                           <  1:78389/101‑7
                                             CTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAtcgctta                          >  1:323706/1‑94
                                              TTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAtcgcttaa                         >  2:1570431/1‑93
                                                CATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAtcgcttaaat                       <  1:1549966/101‑11
                                                      GATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATA                 >  1:1545062/1‑101
                                                       ATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATAT                >  1:1056476/1‑101
                                                        TTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATA               <  1:1064897/101‑1
                                                        TTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATA               >  2:825227/1‑101
                                                         TTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATAT              <  2:1535637/101‑1
                                                          TCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATT             <  2:574519/101‑1
                                                          TCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATT             <  2:857298/101‑1
                                                            CTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGC           >  2:1047781/1‑101
                                                            CTTGAGCTACTCAGTTTGCTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGC           >  1:1449413/1‑101
                                                             TTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA          <  1:1432110/101‑1
                                                              TGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCAc         <  2:1404199/101‑2
                                                              TGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCAc         >  1:1181892/1‑100
                                                                AGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGGAACCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCAcca       >  2:1093380/1‑98
                                                                  CTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCAccatc     >  1:954302/1‑96
                                                                     CTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCAccatcctc  <  1:283861/101‑9
                                                                     CTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCAccatcctc  >  2:1158530/1‑93
                                                                                                                                                                          
TGTGGCGGTAATTAGTGACACTATGACGACCAGACTCCTGTTGGTCTTCATTGGGATTTCCTTGAGCTACTCAGTTTGTTGACAAAGTGTTCGTTGTTTTTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  119/106‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccggATGCGGAGTGAACGCCTTATCCGGCCTACAAAAGCACGCAAATTCAATATATTGCAGAGATTGC  <  91/8419‑8356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.