New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 115 = 962677 (1.130)34 (0.600)
+GTTCGGCAACGGC
28/174 1.2 44.4% intergenic (–/–) –/– –/–
?150 = 3697 21 (0.340)intergenic (–/–) –/– –/–

ACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  115/9536‑9626
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATGGTGCAC  <  150/3697‑3651
                                                                                           |||||||||||||                                               
aacggTTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAAC                                                    <  1:760579/96‑1
 acggTTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCCACG                                                   >  2:1412568/5‑101
     TTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTG                                               >  1:1424063/1‑101
      TGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGT                                              <  1:311449/101‑1
       GTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTA                                             >  2:1159575/1‑101
        TAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAG                                            >  1:855526/1‑101
        TAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAG                                            <  2:1016366/101‑1
         AGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGG                                           <  2:738775/101‑1
            cgTGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCGCCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCat                                        <  2:46740/99‑3
             ATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATG                                       <  2:904323/101‑1
             ATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATG                                       >  1:1426906/1‑101
                ATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATA                                    >  2:1625374/1‑101
                ATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATA                                    <  1:1585827/101‑1
                  AAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAG                                  <  1:1262820/101‑1
                   AGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGA                                 >  1:123806/1‑101
                          CAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGcaa                          >  2:1235825/1‑98
                          CAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGcaa                          <  2:1426900/101‑4
                          CAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGcaa                          >  2:76891/1‑98
                           AAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGcaag                         >  1:516591/1‑97
                            AGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGC                       <  1:1522823/101‑1
                               GTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTC                    >  2:153343/1‑101
                               GTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTC                    >  2:668063/1‑101
                                 CGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGC                  <  2:1550874/101‑1
                                    ATCAGGCATCGTGCACCGATTGCCGGATGCGGGGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATC               >  2:759100/1‑101
                                    ATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATC               >  2:838940/1‑101
                                       AGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGG            <  1:1159580/101‑1
                                        GGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGC           <  1:1454476/101‑1
                                         GCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCA          <  1:372131/101‑1
                                          CATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCAT         >  1:1105396/1‑101
                                             CGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCCTCAGGCATCGT      >  2:705616/1‑101
                                             CGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGT      <  1:178788/101‑1
                                              GTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTG     <  2:1078014/101‑1
                                               TGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGC    >  1:6044/1‑101
                                                GCACCGATTGGCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCA   <  1:1425300/101‑1
                                                GCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCA   <  2:1048544/101‑1
                                                 CACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTTCGGCAACGGCTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCAC  <  1:982139/101‑1
                                                                                           |||||||||||||                                               
ACTGATTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCATCGTGCACCGATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  115/9536‑9626
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATGGTGCAC  <  150/3697‑3651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.