New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	115	= 8513	0 (0.000)	80 (0.050)	59/200	0.1	100%	intergenic (–/–)	–/–	–/–
	?	222	1 =	0 (0.000)					intergenic (–/–)	–/–	–/–

CATTTGCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  115/8414‑8513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATC  >  222/1‑96                                                                                                                                                                                                      CATTTGCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCT                                                                                                 <  2:1410228/101‑1  ATTTGCGCGGCAGTCACATTCTGCGCATCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTG                                                                                                <  2:667561/101‑1   TTTGCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGT                                                                                               >  2:1114914/1‑101    TTGCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTA                                                                                              <  2:1017386/101‑1      GCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACT                                                                                            <  1:1296316/101‑1      GCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGAACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACT                                                                                            >  2:1492985/1‑101            CAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCC                                                                                      >  2:1170006/1‑101             AGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCA                                                                                     >  2:864310/1‑101             AGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCA                                                                                     >  2:230693/1‑101             AGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCA                                                                                     >  2:1561308/1‑101             AGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCA                                                                                     >  1:968186/1‑101              GTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCAT                                                                                    >  2:490017/1‑101               TCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATT                                                                                   >  1:200579/1‑101                 ACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTT                                                                                 >  2:1368590/1‑101                 ACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTT                                                                                 <  2:1235064/101‑1                            CTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATG                                                                      >  1:1017984/1‑101                            CTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATG                                                                      >  2:1047017/1‑101                               GTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAA                                                                   >  1:533614/1‑101                                TCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAAT                                                                  <  1:1180590/101‑1                                 CAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATG                                                                 <  2:814163/101‑1                                    GAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA                                                              >  1:1196534/1‑101                                     AATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT                                                             >  2:1079542/1‑101                                     AATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT                                                             <  1:1288513/101‑1                                      ATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                                            <  2:1386739/101‑1                                      ATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                                            <  1:963710/101‑1                                      ATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                                            <  1:565003/101‑1                                       TGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                                           <  1:387214/101‑1                                       TGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                                           <  1:1646480/101‑1                                       TGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                                           <  1:887317/101‑1                                       TGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                                           <  1:61220/101‑1                                         ACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC                                                         >  2:158507/1‑101                                          CGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC                                                        >  2:1135448/1‑101                                           GACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGTACGATGAAATGGAATAGCCCC                                                       >  1:17738/1‑101                                           GACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                       <  2:205897/101‑1                                           GACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                       >  2:34050/1‑101                                           GACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                       <  1:546789/101‑1                                           GACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC                                                       >  1:1361801/1‑101                                            ACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT                                                      <  1:755000/101‑1                                               GCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                                   >  2:896191/1‑101                                                 ATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                 <  1:1713916/101‑1                                                 ATTTGCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                                                 >  2:1713910/1‑101                                                    TTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTC                                              <  1:643910/101‑1                                                      CAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                                            >  2:767570/1‑101                                                      CAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                                            <  2:1289794/101‑1                                                       AAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAA                                           >  2:1680176/1‑101                                                        AAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG                                          <  2:712094/101‑1                                                        AAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG                                          <  1:12575/101‑1                                                         AGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGC                                         <  1:529294/101‑1                                                         AGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGC                                         <  1:1561314/101‑1                                                            TACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA                                      <  2:634339/101‑1                                                             ACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAA                                     <  1:443865/101‑1                                                               GTCCACGCATATAGGCGAACGGCGCAATTTCCACTTTCTGTACTGCAGCCATTTTGTGGGACGGTGAAATGGAATAGCCCCTAATATGACAGAGCCAAAAa                                   >  2:1643034/1‑100                                                               GTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                   >  1:365250/1‑101                                                               GTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                   <  2:65561/101‑1                                                               GTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT                                   <  2:1537635/101‑1                                                                 ccgCGCATCTAGGCGATCGCCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC                                 <  2:1601522/98‑1                                                                   ACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCC                               <  2:536731/101‑1                                                                   ACGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCC                               <  1:490022/101‑1                                                                    CGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCT                              <  2:715014/101‑1                                                                    CGCATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCT                              <  2:210976/101‑1                                                                       ATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT                           >  2:798598/1‑101                                                                       ATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTT                           <  2:159584/101‑1                                                                       ATATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCGTTT                           <  2:1041346/101‑1                                                                        TATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                          <  1:1586601/101‑1                                                                        TATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTG                          <  2:1189579/101‑1                                                                         ATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA                         <  1:1170011/101‑1                                                                         ATAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA                         <  1:1680182/101‑1                                                                          TAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA                        >  1:605825/1‑101                                                                          TAGGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA                        <  2:1644955/101‑1                                                                            GGCGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA                      <  1:247303/101‑1                                                                              CGAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC                    >  1:1309235/1‑101                                                                               GAACGGCGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCG                   >  1:1324343/1‑101                                                                                     CGCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGA             >  2:1524677/1‑101                                                                                      GCAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAA            <  1:1380894/101‑1                                                                                       CAATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAG           >  2:187048/1‑101                                                                                        AATTTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGT          >  1:288425/1‑101                                                                                           TTCCACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGT       >  2:691893/1‑101                                                                                             ccgCCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGACAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGA     <  2:17738/98‑1                                                                                               ACCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT   <  1:1582953/101‑1                                                                                                CCTTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATC  <  1:39231/101‑1                                                                                                                                                                                                      CATTTGCGCGGCAGTCACATTCTGCGCCTCGTCAAGAATGACGACTGCATTTTCAAAGGTACGTCCACGCATATAGGCGAACGGCGCAATTTCCACCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  115/8414‑8513 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATC  >  222/1‑96

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.