New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 113 | = 14540 | 0 (0.000) | 33 (0.630) | 19/180 | 2.6 | 100% | intergenic (–/–) | –/– | –/– |
? | 218 | 11 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AAGCGTCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 113/14431‑14540 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 218/11‑109 GTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AA < 2:606933/101‑1 TGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AAG < 1:1327784/101‑1 GCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCANGCACAGGTTTGTANNNNNNNNAAGACGC‑GT‑AAGCGTC > 2:1626600/1‑101 CATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AAGCGTCG < 1:617099/101‑1 ATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCTGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AAGCGTCGC > 1:1245132/1‑101 ATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AAGCGTCGC > 1:415492/1‑101 CGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGC > 2:463075/1‑101 GGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCC < 2:194957/101‑1 TGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTAC < 1:675621/101‑1 gtgAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTT > 1:113972/4‑101 gtgAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTT > 1:1687423/4‑101 gtgAACGCCTTATCAGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTT > 1:327391/4‑101 tgAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTT > 2:1633988/3‑101 gAACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTA > 2:1416056/2‑101 AACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTAC > 2:755810/1‑101 ACGCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGGCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACT > 1:1099849/1‑101 GCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCT > 1:508807/1‑101 GCCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCT < 1:705278/101‑1 CCTTATCCGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTT < 2:1078638/101‑1 CGGCCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCA < 1:1416062/101‑1 CCTACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAA > 1:499327/1‑101 TACGGTTCTGGCAC‑CTTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACC < 1:1503549/101‑1 tctggcacctTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAG < 1:1623775/91‑1 ctggcacctTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGC < 1:1462092/92‑1 ctggcacctTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGC < 2:1035375/92‑1 gcacctTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCC < 2:1110696/95‑1 cctTTTGTAGGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCG < 2:969381/98‑1 GGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCT > 1:1607723/1‑101 GGCCTGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCT < 1:729214/101‑1 TGATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAA < 1:1535188/101‑1 TGATAAGACGC‑GGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAA > 2:725622/1‑101 GATAAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAAT < 2:1006326/101‑1 AAGACGCGGC‑AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCAC > 1:50607/1‑101 gacgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCG < 2:403319/93‑1 gacgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCG < 1:1255094/93‑1 acgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGT < 1:1667260/94‑1 acgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGT < 1:1587803/94‑1 cgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTG < 1:1184580/95‑1 AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGC > 2:1299406/1‑101 AGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCC > 2:1011085/1‑101 GTCGCATCAGGCGTGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTA < 1:463080/101‑1 ATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 2:1438946/1‑101 ATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 2:158393/1‑101 ATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 1:838946/1‑101 GTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGC‑GT‑AAGCGTCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 113/14431‑14540 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC > 218/11‑109 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |