New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 113 = 145400 (0.000)33 (0.630) 19/180 2.6 100% intergenic (–/–) –/– –/–
?218 11 = 0 (0.000)intergenic (–/–) –/– –/–

GTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAAGCGTCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  113/14431‑14540
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC  >  218/11‑109
                                                                                                                                                                                                                   
GTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAA                                                                                                              <  2:606933/101‑1
 TGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAAG                                                                                                             <  1:1327784/101‑1
     GCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCANGCACAGGTTTGTANNNNNNNNAAGACGCGTAAGCGTC                                                                                                         >  2:1626600/1‑101
      CATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAAGCGTCG                                                                                                        <  1:617099/101‑1
       ATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCTGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAAGCGTCGC                                                                                                       >  1:1245132/1‑101
       ATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAAGCGTCGC                                                                                                       >  1:415492/1‑101
                              CGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGC                                                                                >  2:463075/1‑101
                               GGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCC                                                                               <  2:194957/101‑1
                                  TGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTAC                                                                            <  1:675621/101‑1
                                        gtgAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTT                                                                      >  1:113972/4‑101
                                        gtgAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTT                                                                      >  1:1687423/4‑101
                                        gtgAACGCCTTATCAGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTT                                                                      >  1:327391/4‑101
                                         tgAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTT                                                                     >  2:1633988/3‑101
                                          gAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTA                                                                    >  2:1416056/2‑101
                                           AACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTAC                                                                   >  2:755810/1‑101
                                            ACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGGCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACT                                                                  >  1:1099849/1‑101
                                              GCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCT                                                                >  1:508807/1‑101
                                              GCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCT                                                                <  1:705278/101‑1
                                               CCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTT                                                               <  2:1078638/101‑1
                                                      CGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCA                                                        <  1:1416062/101‑1
                                                         CCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAA                                                     >  1:499327/1‑101
                                                           TACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACC                                                   <  1:1503549/101‑1
                                                                  tctggcacctTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAG                                             <  1:1623775/91‑1
                                                                   ctggcacctTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGC                                            <  1:1462092/92‑1
                                                                   ctggcacctTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGC                                            <  2:1035375/92‑1
                                                                      gcacctTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCC                                         <  2:1110696/95‑1
                                                                         cctTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCG                                      <  2:969381/98‑1
                                                                                  GGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCT                             >  1:1607723/1‑101
                                                                                  GGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCT                             <  1:729214/101‑1
                                                                                      TGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAA                         <  1:1535188/101‑1
                                                                                      TGATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAA                         >  2:725622/1‑101
                                                                                       GATAAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAAT                        <  2:1006326/101‑1
                                                                                          AAGACGCGGCAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCAC                     >  1:50607/1‑101
                                                                                             gacgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCG                   <  2:403319/93‑1
                                                                                             gacgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCG                   <  1:1255094/93‑1
                                                                                              acgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGT                  <  1:1667260/94‑1
                                                                                              acgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGT                  <  1:1587803/94‑1
                                                                                               cgcggcAAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTG                 <  1:1184580/95‑1
                                                                                                     AAGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGC           >  2:1299406/1‑101
                                                                                                      AGCGTCGCATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCC          >  2:1011085/1‑101
                                                                                                         GTCGCATCAGGCGTGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTA       <  1:463080/101‑1
                                                                                                              ATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC  >  2:1438946/1‑101
                                                                                                              ATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC  >  2:158393/1‑101
                                                                                                              ATCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC  >  1:838946/1‑101
                                                                                                                                                                                                                   
GTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCAGGCACAGGTTTGTAGGCCTGATAAGACGCGTAAGCGTCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  113/14431‑14540
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgtcgcatCAGGCATGATGCGCCAATTGCCTACGTTTTTTACTCTTGTGGCCATAACCACGCAGCGCCGCGTACGCCGCTGGAATCACCGTGCTTCGCCTTACGCAC  >  218/11‑109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.