New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 113 = 1449624 (0.410)41 (0.630) 26/192 1.7 78.1% intergenic (–/–) –/– –/–
?147 = 9950 0 (0.000)intergenic (–/–) –/– –/–

AAGGAATAAGTACATCATTGCGGATGCGCTGCTTTAGGGTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  113/14393‑14496
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTTAACCAG  <  147/9950‑9854
                                                                                                                                                                                                         
AAGGAATAAGTACATCATTGCGGATGCGCTGCTTTAGGGTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACG                                                                                                      >  2:766055/1‑101
  GGAATAAGTACATCATTGCGGATGCGCTGCTTTAGGGTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGT                                                                                                    >  2:761891/1‑101
                                                        atgtgaaACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCA                                              >  2:1406306/8‑101
                                                        atgtgaaACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCA                                              >  1:970390/8‑101
                                                            gaaACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCG                                          <  1:1129579/98‑1
                                                               ACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCA                                       <  2:896626/101‑1
                                                                CTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAG                                      >  1:1713743/1‑101
                                                                     GGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCT                                 >  1:1589731/1‑101
                                                                     GGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCT                                 <  2:647989/101‑1
                                                                      GATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTC                                <  1:608765/101‑1
                                                                       ATGCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCT                               <  2:757011/101‑1
                                                                       ATGCGGCATAAGCTCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGACATTAATTAAGCTTCAGCCGCCAGCATCTCT                               <  1:1068494/101‑1
                                                                         GCGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTT                             <  1:233355/101‑1
                                                                          CGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGTCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTC                            >  1:981007/1‑101
                                                                          CGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTC                            <  2:869812/101‑1
                                                                          CGGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTC                            >  2:1459930/1‑101
                                                                           GGCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCT                           <  2:1127644/101‑1
                                                                            GCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTT                          <  1:1456564/101‑1
                                                                            GCGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTT                          >  1:739542/1‑101
                                                                             CGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTA                         <  1:1060069/101‑1
                                                                             CGTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTA                         <  2:41612/101‑1
                                                                              GTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTAC                        <  2:779534/101‑1
                                                                              GTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTAC                        >  2:644517/1‑101
                                                                              GTAAACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTAC                        >  1:824831/1‑101
                                                                                 AACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTc                     >  1:750103/1‑100
                                                                                 AACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTT                     >  1:1480058/1‑101
                                                                                 AACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTT                     >  2:684678/1‑101
                                                                                  ACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTG                    <  1:164829/101‑1
                                                                                  ACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTG                    <  1:1491463/101‑1
                                                                                  ACGCCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTG                    <  2:168982/101‑1
                                                                                     CCTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCT                 <  2:1674310/101‑1
                                                                                      CTTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTA                >  2:375286/1‑101
                                                                                       TTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAA               <  1:1257552/101‑1
                                                                                       TTATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAA               <  2:1217222/101‑1
                                                                                        TATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAAT              >  1:933173/1‑101
                                                                                        TATCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATAAGGCCATTAATTAAGCTTCAGCCGCCAGCATATTTTTCTTACGTTGGCTAAT              >  2:1668623/1‑101
                                                                                          TCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGTCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATAC            <  1:198985/101‑1
                                                                                          TCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATAC            <  1:421436/101‑1
                                                                                          TCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATAC            <  2:1509183/101‑1
                                                                                          TCCGGCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATAC            <  1:46499/101‑1
                                                                                              GCCTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTT        <  1:1694927/101‑1
                                                                                                CTACGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTTAA      >  2:781837/1‑101
                                                                                                   CGGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTTAACCA   >  2:3067/1‑101
                                                                                                    GGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTTAACCAG  >  2:1374898/1‑101
                                                                                                    GGTTGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTTAACCAG  >  2:600908/1‑101
                                                                                                                                                                                                         
AAGGAATAAGTACATCATTGCGGATGCGCTGCTTTAGGGTGGCGCATTTGGCATCGACGCATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  113/14393‑14496
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttGATACGGTTTTCGTTGGCCGGATTAAGCACATCCGGCCATTAATTAAGCTTCAGCCGCCAGCATCTCTTTCTTACGTTGGCTAATACGCTTAACCAG  <  147/9950‑9854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.