New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	113	= 14494	24 (0.410)	27 (0.680) +GGAGCATTTGTAGGCCTGATAAGACGCGGCAAG	22/134	0.7	77.0%	intergenic (–/–)	–/–	–/–
	?	69	= 23343	0 (0.000)					intergenic (–/–)	–/–	–/–

ATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  113/14453‑14494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATTA  <  69/23343‑23244                                           |||||||||||||||||||||||||||||||||                                                                                                     acggtTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCA                                                                            >  1:958974/6‑101 acggtTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCA                                                                            >  1:516577/6‑101  cggtTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAA                                                                           >  1:920652/5‑101    gtTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAAC                                                                         <  1:655931/99‑1      TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACAT                                                                       >  2:445550/1‑101        CCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGTGTCGCATCAGGCATTGGCGCGGCCAAACATCA                                                                     >  2:261559/1‑101          GGATGCGGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAAC                                                                   <  2:776818/101‑1                GGCGTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACT                                                             <  1:262081/101‑1                 GCGTAAACGCCTTATCCGGCCTACGGGGAGCATGTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGGATTGGCGCGGCCAAACATCAACCTCACTT                                                            <  2:1118736/101‑1                   GTAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTAT                                                          >  1:104656/1‑101                    TAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATT                                                         <  2:1276758/101‑1                    TAAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATT                                                         >  1:1290228/1‑101                     AAACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTC                                                        >  2:1259494/1‑101                      AACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCT                                                       <  1:150106/101‑1                       ACGCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTG                                                      >  2:115293/1‑101                         GCCTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCG                                                    >  1:543276/1‑101                           CTTATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTG                                                  >  2:1690818/1‑101                              ATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGC                                               >  2:989108/1‑101                              ATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGC                                               <  1:1528416/101‑1                              ATCCGGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGC                                               <  2:1246558/101‑1                                  GGCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCA                                           <  2:1082702/101‑1                                   GCCTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCAT                                          <  2:120829/101‑1                                     CTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATAT                                        <  1:1118744/101‑1                                     CTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATAT                                        <  2:1655031/101‑1                                     CTACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATAT                                        >  1:1597681/1‑101                                      TACGGGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATA                                       <  2:1683629/101‑1                                          GGGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTC                                   >  2:488039/1‑101                                           GGAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCA                                  <  2:417859/101‑1                                            GAGCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCAC                                 >  1:1622742/1‑101                                              GCATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACAT                               <  2:645485/101‑1                                                ATTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCC                             >  1:1354074/1‑101                                                          CTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGC                   <  1:1048142/101‑1                                                           TGATAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCC                  <  2:958969/101‑1                                                              TAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAG               >  2:119347/1‑101                                                              TAAGACGCGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAG               <  2:941558/101‑1                                                                     CGGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAA        <  1:337183/101‑1                                                                      GGCAAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAG       >  2:633366/1‑101                                                                         AAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTAT    <  1:445555/101‑1                                                                         AAGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTAT    >  2:853459/1‑101                                                                          AGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATT   <  2:447198/101‑1                                                                          AGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATT   <  2:1622736/101‑1                                                                          AGCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATT   <  2:416635/101‑1                                                                           GCGTCGCATTAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATTA  <  1:1406943/101‑1                                                                           GCGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATTA  <  2:634262/101‑1                                           |||||||||||||||||||||||||||||||||                                                                                                     ATGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  113/14453‑14494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCGCATCAGGCATTGGCGCGGCCAAACATCAACCTCACTTATTCTGCGTGTGCAGCATATAGTTCACATCCACGCCGGGGCCGAGTTTAAAAGTATTA  <  69/23343‑23244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.