New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 113 | = 4964 | 3 (0.050) | 57 (0.040) | 47/198 | 0.2 | 97.5% | intergenic (–/–) | –/– | –/– |
? | 222 | = 1442 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCCATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 113/4867‑4964 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT < 222/1442‑1346 GACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTA > 1:789484/1‑101 ACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTAC > 2:1111436/1‑101 CCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACT < 1:1668895/101‑1 CTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTG > 1:325457/1‑101 GGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGAC < 2:1631737/101‑1 GCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTGAGCCCCAATGTGTACTGACCC > 2:1340927/1‑101 GCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCC > 1:888799/1‑101 CAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCC > 2:542547/1‑101 CTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGA > 2:1357830/1‑101 TTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGAC < 1:970327/101‑1 TTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGAC < 1:1713054/101‑1 TTAAGCGCCTGCTGCCGGGGCGCGAGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGAC > 2:176257/1‑101 AAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAG > 2:615514/1‑101 GCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTT < 1:293842/101‑1 CTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:1280361/101‑1 CTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 2:1190890/1‑101 CTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:427281/1‑101 TGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:1340933/101‑1 TGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 2:437171/1‑101 GGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA < 2:336621/101‑1 GGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGACCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCA > 2:521211/1‑101 CGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA > 1:1586828/1‑101 GCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 2:1155007/101‑1 CGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 1:357090/1‑101 TGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGcc > 1:1334847/1‑99 TGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC < 2:715476/101‑1 GATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCT < 1:1064732/101‑1 GATGGACAAAATATTGCAGGGGAGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGACT > 2:1284822/1‑101 ATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG < 2:1483896/101‑1 ATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG < 1:209993/101‑1 ATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG < 1:1371494/101‑1 GACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATT < 2:1143959/101‑1 ACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTC > 2:1701722/1‑101 CAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCC < 1:615519/101‑1 TATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT < 1:583970/101‑1 TATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT < 2:888794/101‑1 AGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATT < 1:1223616/101‑1 GGTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGA < 1:1280305/101‑1 GTGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAG < 1:1515870/101‑1 TGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT < 1:1199135/101‑1 TGAGTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGT > 1:668389/1‑101 GTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG > 1:980265/1‑101 GTTGAAGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG < 2:585817/101‑1 AGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTT < 1:1190895/101‑1 AGCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTT < 2:244260/101‑1 GCGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTT < 2:1082481/101‑1 CGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTT < 2:333898/101‑1 CGCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTT < 1:599157/101‑1 GCGCGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTA < 1:986567/101‑1 CGCTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATT > 2:694781/1‑101 CTTAAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTC < 1:1206873/101‑1 AAGCCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGG < 1:101563/101‑1 CCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTA > 2:1303951/1‑101 CCCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTA > 2:41168/1‑101 CCCAATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAA > 2:953805/1‑101 ccaATGTGCACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGACTGATTCCGATATTCAATTGGAGTCAGACATTTTAATTTCAGGCTAAT > 2:101814/4‑101 ATGTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT < 1:1131558/101‑1 GACCTGGGCAGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGAGTTGAAGCGCGCGCTTAAGCCCCCATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 113/4867‑4964 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTCT < 222/1442‑1346 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |