New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 110 = 152360 (0.000)43 (0.800)
+GCGTGAACGCCTTATCCGGCCTACA
37/150 0.5 100% intergenic (–/–) –/– –/–
?131 = 13095 0 (0.000)intergenic (–/–) –/– –/–

ATCATCGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  110/15137‑15236
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAAT  <  131/13095‑12996
                                                                                                    |||||||||||||||||||||||||                                                                                                    
ATCATCGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGG                                                                                                                              >  1:1545717/1‑101
   ATCGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGGGTTGTGTCCGTTAGGTGCGGGTAATCAAATTTTTGCCGGATGAGGCGg                                                                                                                           >  1:402849/1‑100
     CGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGA                                                                                                                         >  2:28063/1‑101
       CCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAAC                                                                                                                       <  2:982070/101‑1
        CCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACG                                                                                                                      >  1:1530036/1‑101
         CCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGC                                                                                                                     >  1:13060/1‑101
           GACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCT                                                                                                                   <  2:756483/101‑1
                  TGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGG                                                                                                            <  1:1587891/101‑1
                      AAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA                                                                                                        >  1:884855/1‑101
                      AAGGACTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCTGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTA                                                                                                        >  2:585764/1‑101
                       AGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC                                                                                                       >  2:246643/1‑101
                        GGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACA                                                                                                      >  2:1343548/1‑101
                          TCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAC                                                                                                    <  2:556981/101‑1
                           CTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACG                                                                                                   >  1:395459/1‑101
                              TGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGC                                                                                                <  1:299614/101‑1
                                 GCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTCATCCGGCCTACAACGGGCAAT                                                                                             >  2:1203992/1‑101
                                  CAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATT                                                                                            <  2:210728/101‑1
                                     AGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTA                                                                                         >  2:569185/1‑101
                                     AGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTA                                                                                         >  1:1477556/1‑101
                                      GGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTAC                                                                                        >  2:794845/1‑101
                                        TGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGG                                                                                      >  1:814078/1‑101
                                         GGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGC                                                                                     >  2:1667668/1‑101
                                           CAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCC                                                                                   >  2:1439733/1‑101
                                           CAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCC                                                                                   >  1:895231/1‑101
                                             GATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTTATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCC                                                                                 >  2:347545/1‑101
                                              ATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCG                                                                                >  1:70370/1‑101
                                                TTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTT                                                                              <  1:1076987/101‑1
                                                    TGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATC                                                                          >  1:452314/1‑101
                                                     GGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCT                                                                         <  2:46086/101‑1
                                                     GGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCT                                                                         <  1:755030/101‑1
                                                         TTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAA                                                                     >  2:988060/1‑101
                                                          TGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAAC                                                                    >  1:530562/1‑101
                                                            TGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTA                                                                  <  1:868066/101‑1
                                                             GTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTAT                                                                 >  1:1487237/1‑101
                                                              TCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATA                                                                >  2:421691/1‑101
                                                               CCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATAC                                                               <  1:1362549/101‑1
                                                                CGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACC                                                              <  1:306229/101‑1
                                                                 GTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCA                                                             <  1:1255395/101‑1
                                                                    AGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTA                                                          <  1:336991/101‑1
                                                                    AGGTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTA                                                          <  1:920742/101‑1
                                                                      GTGCGGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGC                                                        >  1:831192/1‑101
                                                                       TGCGGTTAATCAAATTTTTGCCGGATGCGGCATGAACGCCTTATCAGGCCTATAACGGTCACTTTTACGGCCCCCGTTAATCTCAGACTATACCATTAGCc                                                       >  2:1403690/1‑100
                                                                          GGTTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTG                                                    <  1:246643/101‑1
                                                                            TTAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGA                                                  <  2:814073/101‑1
                                                                            TTAATCAAATTTTGGGCGGATGCGGCGTGAACGCCTTATCCGGCCTTCAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGA                                                  <  1:1024169/101‑1
                                                                             TAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAA                                                 >  1:1192893/1‑101
                                                                             TAATCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAACACAGGAA                                                 >  1:244023/1‑101
                                                                                TCAAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTT                                              <  1:794850/101‑1
                                                                                  AAATTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGG                                            <  1:131955/101‑1
                                                                                     TTTTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCAC                                         <  1:325999/101‑1
                                                                                         TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTAC                                     <  2:1530030/101‑1
                                                                                          GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACA                                    <  1:1243431/101‑1
                                                                                            CGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGG                                  >  2:640770/1‑101
                                                                                            CGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGG                                  <  2:1240296/101‑1
                                                                                                TGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGG                              <  2:283025/101‑1
                                                                                                      GTGAACGCCTAATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAA                        <  2:844804/101‑1
                                                                                                           CGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGA                   <  2:158878/101‑1
                                                                                                            GCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAA                  <  1:605755/101‑1
                                                                                                              CTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAA                <  1:237586/101‑1
                                                                                                              CTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAA                >  2:101811/1‑101
                                                                                                                TATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACT              <  1:1479012/101‑1
                                                                                                                TATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACT              <  2:1376438/101‑1
                                                                                                                 ATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTG             >  2:1682634/1‑101
                                                                                                                 ATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTG             >  2:862916/1‑101
                                                                                                                  TCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGG            <  1:28063/101‑1
                                                                                                                   CCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGT           <  1:817080/101‑1
                                                                                                                    CGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTC          <  2:421874/101‑1
                                                                                                                     GGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCA         <  2:530557/101‑1
                                                                                                                     GGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCA         >  2:883509/1‑101
                                                                                                                     GGCCTACAACGGGCAATTTTACGGCCCCCGGTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGGGGGCAAAAAAACGAAAACTGGTCA         >  2:1385445/1‑101
                                                                                                                        CTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACC      >  1:152857/1‑101
                                                                                                                         TACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCA     >  1:1706623/1‑101
                                                                                                                          ACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAA    <  1:47353/101‑1
                                                                                                                            AACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAAT  <  2:1453698/101‑1
                                                                                                    |||||||||||||||||||||||||                                                                                                    
ATCATCGCCCCGACTTCCTGGTAAGGTCTTTGCGCAGAGGTGGCAGATTTCATGGTGTTGTGTCCGTTAGGTGCGGTTAATCAAATTTTTGCCGGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  110/15137‑15236
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAAT  <  131/13095‑12996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.