New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 108 | 1 = | 0 (0.000) | 61 (0.910) +CCTGC |
45/190 | 0.4 | 100% | intergenic (–/–) | –/– | –/– |
? | 11 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AAGCCCAGTACGCTCACAGCCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 108/99‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT > 11/1‑98 ||||| AAGCCCAGTACGCTCACAGCCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCC < 1:413526/101‑1 AGCCCAGTACGCTCACAGCCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCT < 1:175651/101‑1 CGCTCACAGCCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACC < 1:222653/101‑1 CAGCCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATC < 1:498572/101‑1 CCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTCCCAGTACCATCATCTGC > 2:1546825/1‑101 CAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCA > 2:494692/1‑101 CAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCA > 1:1334765/1‑101 ATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGA > 1:672428/1‑101 ATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGCCGGTAATGCGCCTGCCAGTACCATCATCTGCAGA > 2:443013/1‑101 TGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGAT < 1:65798/101‑1 GCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTC > 1:1682486/1‑101 CTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCG < 2:757680/101‑1 AGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCA < 2:1219976/101‑1 GTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAA > 2:205888/1‑101 GTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAAAGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAA > 1:1616805/1‑101 TACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAA < 1:377718/101‑1 ACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAAT > 2:1359760/1‑101 CGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATG > 2:939998/1‑101 CGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATG < 1:1076848/101‑1 GTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGAaa < 1:325897/101‑3 TGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACAT < 2:965113/101‑1 TGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAAAGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACAT < 2:1616799/101‑1 TGTAAACATAAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACAT < 2:289586/101‑1 AGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCC > 1:1046569/1‑101 ACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAAAGACATGCCAT < 1:494697/101‑1 ATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTTAAATGACATGCCATAC > 1:1559121/1‑101 ATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATAC > 2:233111/1‑101 ATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAACGGGCCTGCCAGTACCATCATCTGCAGATGGTGGCTGCTCCAATGACATGCCATAC > 2:12046/1‑101 ACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACG > 1:869429/1‑101 CGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAA < 1:180383/101‑1 GGCGGGAAATAATGTGGCAGGAGAGTCCCGGCGGCAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAA < 1:192745/101‑1 GCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGCACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAA < 2:1693078/101‑1 CTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAG < 2:1011598/101‑1 GCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAG > 2:251301/1‑101 GCAATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAG < 2:1376646/101‑1 AATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTG > 1:1697261/1‑101 AATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTG > 2:1696166/1‑101 AATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTG > 1:638199/1‑101 ATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGC < 1:1380830/101‑1 ATAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGC < 2:473686/101‑1 TAATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGac > 2:639239/1‑99 AATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCA > 2:283316/1‑101 ATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAG < 2:1037012/101‑1 ATGATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAG < 2:1647/101‑1 ATTCCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGG > 1:724789/1‑101 ATTCCGGAGAACGCCGGCGGTAACGCCCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGG < 2:1029642/101‑1 CCGGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCAT < 1:6408/101‑1 GGAGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCA > 1:450200/1‑101 AGAATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGA > 1:788059/1‑101 AATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAAT < 2:144538/101‑1 ATGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATC > 2:1283487/1‑101 TGCCGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCA < 1:956570/101‑1 TGCCGGCGGTAATGCCCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCA < 1:804334/101‑1 tccagcaGTAATGCACCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGACATCCCAAAGAAAAGCAGTGCCAGTGGCATCAGAATCAG < 2:185387/94‑1 CGGCGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCT < 2:672423/101‑1 GCGGTAATGCGCCTGCCAGTACCACCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTC < 2:1261408/101‑1 gGGTAATGCCCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCA < 1:1224607/100‑1 ctgaAATGCCCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCA < 2:1258261/97‑1 CGGTAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCA < 2:919007/101‑1 TAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGA < 1:90013/101‑1 TAATGCGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGA > 1:496490/1‑101 TGCCCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGG < 2:125854/101‑1 gccCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGCAAGGT < 1:1300944/98‑1 CGCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTG > 1:1405646/1‑101 cCCTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGT < 1:283316/100‑1 CTGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTA > 1:1173722/1‑101 TGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT < 1:205888/101‑1 TGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT < 2:574369/101‑1 TGCCAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT < 2:1682480/101‑1 ||||| AAGCCCAGTACGCTCACAGCCAATGACGCTGTACCAGTACGGGTGTAGACATTAAACCGGCTGGCAATAATGATTCCGGAGAATGCCGGCGGTAATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 108/99‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTACCATCATCTGCAGATGTTCGCTGTTCAAATGACATGCCATACCAACGAAAAGCAGTGCCAGTGGCATCAGAATCAGCTTCAGGAAGGTGTTAT > 11/1‑98 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |