| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 107 | 1 = | 0 (0.000) | 48 (0.050) +T |
38/198 | 1.5 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 223 | = 698 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CCAATAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 107/100‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT < 223/698‑621 | CCAATAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACT < 1:1049798/101‑1CCAATAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACT > 1:663579/1‑101 CAATAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTT < 1:1036469/101‑1 AATAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTA > 2:2082/1‑101 TAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACT < 1:813806/101‑1 AGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTG > 2:1108860/1‑101 AGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTG > 1:731051/1‑101 AAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGAT > 1:1709488/1‑101 AAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATT > 2:112927/1‑101 AAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATT < 2:554222/101‑1 AAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATT < 2:694390/101‑1 GATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGA > 1:117272/1‑101 GATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCAAACTTACTGATTTAGTGTATGA > 1:496847/1‑101 ATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT < 1:1313478/101‑1 GCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG < 2:1619289/101‑1 TCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT > 2:1150734/1‑101 ATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGtg < 2:392438/101‑3 AAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGC > 1:1107593/1‑101 AAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT > 2:444341/1‑101 AGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC < 1:1574420/101‑1 AAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:174007/101‑1 AAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA < 2:537361/101‑1 AAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCA > 2:626427/1‑101 AGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG < 2:1545169/101‑1 CTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG > 1:918770/1‑101 CTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC > 2:1118027/1‑101 CGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG < 1:183603/101‑1 GCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT < 1:362462/101‑1 GCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT < 1:501650/101‑1 AATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT < 1:388524/101‑1 ATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC < 1:577984/101‑1 ATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC < 1:112927/101‑1 ACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT < 1:1188963/101‑1 ACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT > 2:263928/1‑101 CTACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG > 2:1030545/1‑101 ACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC > 2:1369633/1‑101 ACGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC < 1:1694782/101‑1 CGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC < 1:967937/101‑1 CGATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCC > 1:1142948/1‑101 GATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC < 2:812084/101‑1 GATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC < 2:812035/101‑1 ATGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT < 2:1644554/101‑1 TGTTGCAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC > 2:23181/1‑101 CAACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT < 1:550217/101‑1 AACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC < 1:1108865/101‑1 ACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA > 1:1287129/1‑101 ACAACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA > 1:119001/1‑101 AACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC > 2:1510038/1‑101 ACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT < 2:888287/101‑1 ACACGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTACCAGCTGTCCCTCCTGTTCAGCT < 2:1119949/101‑1 | CCAATAGAAAATATTGGCGATGCGCTCGAACGAATAAAGAAGCTCTAGGCGCAATCCACACACTACGATGTTGCAACAACACGCCGGTGATGCTGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 107/100‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT < 223/698‑621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |