| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 100 | = 16396 | 0 (0.000) | 49 (0.800) +C |
36/198 | 0.9 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 64 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GGCTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 100/16297‑16396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAGTC > 64/1‑97 | GGCTCAATCTTCAATGTTGGCTCGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGTTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCCCAC < 2:1086309/101‑1GGCTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCAC > 1:840331/1‑101 GCTCAATCTTAAATTTTGGCCCGCTTTCCCCCCCGCCCTTTCGGGGAGGGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACC < 2:285001/101‑1 CTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTTACCC > 1:133951/1‑101 cactttgctATGTTGGCACGCTTTCCCCCCCGCCTTTCCGGGGAGAGGGCGGGGGTGAGGGAAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTA < 2:1151024/92‑1 CAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTA < 2:166554/101‑1 ATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAAC < 1:869796/101‑1 CAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCT < 2:451354/101‑1 ATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCC < 2:254516/101‑1 ATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCC < 1:1203300/101‑1 TGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCC < 2:1311864/101‑1 CACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGG < 1:159487/101‑1 CACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGG < 1:982165/101‑1 ACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGG < 1:983911/101‑1 GCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGT < 2:459215/101‑1 TTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTTCCCTCACCCCCACCCCCTCCCCccacgggggg > 1:99038/1‑91 TTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGA < 1:1427051/101‑1 TTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGcg > 2:825491/1‑99 TCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGG < 2:668889/101‑1 TTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAG < 1:1673239/101‑1 TTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAG < 1:612142/101‑1 GAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTT < 1:159028/101‑1 GAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGT < 1:233717/101‑1 GGGCCGGGGCGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTAC < 2:875456/101‑1 CGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTG < 1:584444/101‑1 GGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGT < 2:914695/101‑1 GGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGT < 1:39747/101‑1 GGGGGGAGGGTAAATATTCGCGCCAGTGCCATCCTGTTCCCCCCACCCTAGCCCTCACCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGT < 2:1234562/101‑1 GGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCA < 1:439573/101‑1 GTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCAT > 1:542407/1‑101 GAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCT < 2:1380332/101‑1 GTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCCAAGGGGGGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACT > 2:1121115/1‑101 GTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGGGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACT > 2:829874/1‑101 CGCCAGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCC < 1:735084/101‑1 AGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAG < 2:1235406/101‑1 AGTGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAG < 1:732807/101‑1 CGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCT < 2:290200/101‑1 GGCCTGTTCCCCTCACCCTAACCCTCTCCCTAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTTACTAAAAAGGCGCCGAAGCGCCTT > 1:1158438/1‑101 CCTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTA < 2:1237298/101‑1 CTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAG < 2:1372508/101‑1 CTGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAG < 1:813516/101‑1 TTCCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAG < 2:724598/101‑1 CCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGAT < 2:453521/101‑1 CCCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGAT < 1:825496/101‑1 CCCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATA > 2:1272813/1‑101 CCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAG < 2:584421/101‑1 CCTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAG > 2:94116/1‑101 CTCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAGT > 1:1185894/1‑101 TCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAGTC < 2:1625802/101‑1 TCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAGTC < 2:1323171/101‑1 TCACCCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAGTC < 2:651639/101‑1 | GGCTCAATCTTCAATGTTGGCACGCTTTTCCCCTCGCCCTTTCAGGGAGAGGGCCGGGGTGAGGGTAAATATTCGCGCCAGTGCCGGCCTGTTCCCCTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 100/16297‑16396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTAACCCTCTCCCCAAAGGGGTGAGGGGACTGTCTGAGCGCTTTTGTACTTTGTCATCTGACTAAAAAGGCGCCGAAGCGCCTTTAGAAGATAGTC > 64/1‑97 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |