| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 100 | 12778 = | 39 (0.660) | 19 (0.460) +TCTGCGCACCACCGCCGGATGCGGCGTAAAC |
14/138 | 2.5 | 58.5% | intergenic (–/–) | –/– | –/– |
| ? | 168 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCCTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 100/12821‑12778‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTACCCG > 168/1‑96 ||||||||||||||||||||||||||||||| cagaTTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCT > 2:18383/5‑101cagaTTTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCT < 2:238550/97‑1 TTGTAGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCC > 1:318107/1‑101 AGGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCA < 2:128033/101‑1 GGCATGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAA < 2:1101373/101‑1 gcaTGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAAT > 2:1135161/4‑101 caTGATAAGACGCGTCAGCGGCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATA < 1:1106314/99‑1 CTGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATAT < 2:1415544/101‑1 TGATAAGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATC < 2:1055831/101‑1 AGACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCG < 1:889739/101‑1 ACGCGTCAGCGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCG < 2:1441813/101‑1 CGTCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGgagcaac > 1:605399/1‑94 TCGCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAA < 2:973119/101‑1 GCATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATG > 1:201488/1‑101 ATCAGGCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGAT > 2:166812/1‑101 ATCAGGCATCTGCGCACCACCGCCGGATGCGGCATCAACGCCTTATCCGTCCTAAAAAATCGTCTCTTCCCTCAATATCCGCCTCGCGCCCAAAAAATGAT > 2:1423399/1‑101 GCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGC < 1:420896/101‑1 GCATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGC < 2:1461873/101‑1 ATCTGCGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCA > 2:1368664/1‑101 CGCACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAG < 1:1298735/101‑1 CACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGT > 1:17579/1‑101 CACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGT > 1:610734/1‑101 CACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGT < 1:55183/101‑1 ACCACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTT < 1:1135166/101‑1 CACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTGTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCA < 1:1224387/101‑1 CACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCg < 2:1594768/101‑2 ACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAG < 1:134398/101‑1 ACCGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAG < 1:87826/101‑1 GCCGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTA < 2:1431829/101‑1 CGGATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAAC > 1:700716/1‑101 GATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCGTGCCAGAAAGGTTCAGCTAACCG > 1:938554/1‑101 ATGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGA < 1:1127896/101‑1 TGCGGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGAC > 1:1358411/1‑101 GGCGTAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTA < 1:100148/101‑1 TAAACGCCTTATCCGTCCTACAAAATCGTCTCTTCCTCCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTACCCG > 2:816114/1‑101 ||||||||||||||||||||||||||||||| TGCCTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 100/12821‑12778‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTTATCCGTCCTACAAAATCGTCTCTTCCGTCAATATCCGCCGCGCGCCCAAAAAATGATCCTGCCAGAAAGGTTCAGCTAACCGACTTACCCG > 168/1‑96 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |