New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | = 39 | NA (NA) | 33 (0.720) +GCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCG |
21/126 | 1.5 | 100% | intergenic (–/–) | –/– | –/– |
? | 135 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 10/1‑39 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGTG > 135/1‑94 ||||||||||||||||||||||||||||||||||||| ctttgttcaTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAT > 2:1340424/10‑101 ctttgttcaTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAT < 2:765072/92‑1 ttgttcaTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCT > 1:742907/8‑101 ttgttcaTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCT < 1:835333/94‑1 tgttcaTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTT < 2:1082646/95‑1 ttcaTGCCGGATGCGGCGTGAACCCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTATGCCTGATAAGCGTAGCGCATCAGGCAATCTTGT > 1:94176/5‑101 caTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTC < 2:1316226/99‑1 CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGC > 1:585687/1‑101 TGCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAACTTGTTCTCAGCACAT > 1:1405988/1‑101 GCGGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATT > 1:1161536/1‑101 GGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGA > 2:1053609/1‑101 GGCGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGA > 1:1710668/1‑101 CGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATG < 2:1040579/101‑1 CGTGAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATG > 1:513893/1‑101 tcAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGC < 2:60147/99‑1 GAACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCG < 1:219671/101‑1 AACGCCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGC > 1:75181/1‑101 CCTTATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGTTAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTC > 1:1052731/1‑101 CTTATTCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCG < 2:334401/101‑1 TATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTT > 1:1434843/1‑101 ATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTT < 2:620617/101‑1 ATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTT > 1:403168/1‑101 ATCCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTT < 1:971372/101‑1 CCGGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTC > 2:999789/1‑101 GGCCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTA > 1:863117/1‑101 CCTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACT > 2:476794/1‑101 CTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTT < 1:546410/101‑1 CTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTT > 2:1368501/1‑101 CTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTT > 2:1597539/1‑101 CTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTT > 2:1593987/1‑101 CTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTT > 2:67214/1‑101 CTACAAAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTT > 2:177758/1‑101 AAAGCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAA < 2:1405982/101‑1 GCAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACG < 1:173341/101‑1 CAATATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGA < 2:837835/101‑1 TATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGC > 2:871633/1‑101 TATTTTCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGC < 1:1413080/101‑1 TCAACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCAT > 2:1706817/1‑101 AACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 1:1581120/1‑101 AACAGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTC > 2:598476/1‑101 AGGTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACT < 2:1161531/101‑1 TTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATT > 1:483201/1‑101 TTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 2:462222/1‑101 TTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 2:1204831/1‑101 GTAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:580125/1‑101 TAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAAT > 1:1275709/1‑101 TAGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAAT < 1:1694128/101‑1 AGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATC > 1:1182017/1‑101 AGGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATC < 1:1355638/101‑1 GGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCA < 1:598481/101‑1 GGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCA > 2:1429503/1‑101 GGCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCA < 1:1340430/101‑1 GCCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCAC < 1:1026904/101‑1 CCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACC > 2:1459662/1‑101 CCTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACC > 1:819239/1‑101 CTGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCC > 1:1639284/1‑101 TGATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCG > 2:374760/1‑101 ATAAGCGTAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGTG > 2:297244/1‑101 ||||||||||||||||||||||||||||||||||||| ‑‑‑‑‑‑‑‑‑TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 10/1‑39 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGCGCATCAGGCAATCTTGTTCTCAGCACATTGATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGTG > 135/1‑94 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |