New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	10	= 37	NA (NA)	40 (0.920) +GCCATTACCCGTAGGCCTGATAAGCG	26/148	0.5	100%	intergenic (–/–)	–/–	–/–
	?	203	= 4306	0 (0.000)					intergenic (–/–)	–/–	–/–

‑‑‑‑‑‑‑‑‑TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  10/1‑37 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTAC  <  203/4306‑4213                                               ||||||||||||||||||||||||||                                                                                               ggcaaccagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCA                                                                   <  1:1569372/92‑1    aaccagTGCCGGATGCGGCGTGAACGCCTTATCGGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGA                                                                <  1:490613/95‑1      ccagTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAA                                                              >  2:756469/5‑101       cagTGCCGGATGCGGCGTGAACGCCTTACCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAAT                                                             <  2:250392/98‑1        agTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATC                                                            >  2:642121/3‑101         gTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCT                                                           <  1:1014268/100‑1         gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCT                                                           <  2:1685754/100‑1          TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTT                                                          <  2:663042/101‑1           GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTT                                                         <  2:122120/101‑1           GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGACATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTT                                                         <  1:1510522/101‑1             CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAA                                                       <  2:72742/101‑1                ATGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAA                                                    >  1:634765/1‑101                 TGCGGTGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAAC                                                   <  1:62590/101‑1                 TGCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAAC                                                   <  1:354086/101‑1                  ggGGCGTGACCGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACT                                                  <  1:276814/99‑1                  GCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACT                                                  <  1:1661709/101‑1                  GCGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACT                                                  <  2:834918/101‑1                   CGGCGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTG                                                 <  2:545999/101‑1                      CGTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCC                                              >  2:1153629/1‑101                       GTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCC                                             >  1:562611/1‑101                       GTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCC                                             <  1:1239793/101‑1                       GTGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCC                                             >  1:185132/1‑101                        TGAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCT                                            <  2:91684/101‑1                         GAACGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTG                                           >  1:654668/1‑101                            CGCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACA                                        <  1:1655210/101‑1                             GCCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACAC                                       >  2:413796/1‑101                              CCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACT                                      >  1:1331597/1‑101                              CCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACT                                      >  2:773892/1‑101                              CCTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACT                                      >  1:1314133/1‑101                               CTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTA                                     >  2:1273108/1‑101                               CTTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTA                                     >  2:1372794/1‑101                                TTATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAA                                    <  2:1657349/101‑1                                  acCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGA                                  <  2:308510/99‑1                                  ATCCGGCCTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGA                                  >  1:1158628/1‑101                                         CTACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTT                           <  1:1051047/101‑1                                         CTAAAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTT                           <  1:371749/101‑1                                          TACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTT                          <  2:32114/101‑1                                           ACAAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTA                         <  2:562804/101‑1                                             AAGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAA                       >  2:1331532/1‑101                                              AGCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAG                      <  1:1231029/101‑1                                               GCCATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGG                     <  1:1368721/101‑1                                                 CATTACCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTT                   >  1:306739/1‑101                                                      CCCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTC              <  1:1138042/101‑1                                                       CCGTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCG             <  1:36536/101‑1                                                         GTAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCG           >  1:1480432/1‑101                                                          TAGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGA          >  2:666930/1‑101                                                           AGGCCTGATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAG         >  1:744510/1‑101                                                                 GATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTA   >  1:117508/1‑101                                                                  ATAAGCGCAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTAC  >  1:395341/1‑101                                               ||||||||||||||||||||||||||                                                                                               ‑‑‑‑‑‑‑‑‑TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  10/1‑37 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCGCATCAGGCGTAACAAAGAAATGCAGGAAATCTTTAAAAACTGCCCCTGACACTAAGACAGTTTTTAAAGGTTCCTTCGCGAGCCACTAC  <  203/4306‑4213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.