New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 10 1 =0 (0.000)53 (0.860)
+TA
32/196 1.2 100% intergenic (–/–) –/– –/–
?37 1 = 0 (0.000)intergenic (–/–) –/– –/–

CAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/71‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTATG  >  37/1‑99
                                                                       ||                                                                                                   
cgcgtccccTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAG                                                                         <  2:995137/92‑1
   gtccccTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCC                                                                      >  2:459168/7‑101
   gtccccTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCC                                                                      >  1:1512738/7‑101
    tccccTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCC                                                                     >  2:216274/6‑101
    tccccTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGAATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCC                                                                     >  2:566088/6‑101
       ccTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCA                                                                  >  1:36807/3‑101
        cTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCAT                                                                 >  2:1153074/2‑101
        cTGCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCAT                                                                 >  2:91504/2‑101
          GCAATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTA                                                               <  1:1070269/101‑1
            AATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAA                                                             >  2:1384322/1‑101
             ATATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAA                                                            >  1:1108022/1‑101
              TATTTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAG                                                           <  2:1189451/101‑1
                ttTTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTTCCAGAAATCCAGGCCCGCATTAAAAGCG                                                         >  2:258832/3‑101
                  TTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGG                                                       >  2:474758/1‑101
                  TTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGG                                                       <  1:267210/101‑1
                         TGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTT                                                <  2:339646/101‑1
                         TGCACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTT                                                >  1:25828/1‑101
                           CACGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTAT                                              >  2:818731/1‑101
                             CGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGT                                            >  1:907334/1‑101
                             CGATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGT                                            <  2:977803/101‑1
                              GATTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTG                                           >  2:1168034/1‑101
                                TTTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCC                                         >  1:655445/1‑101
                                 TTTGTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCT                                        >  2:388693/1‑101
                                    GTAGGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTAC                                     <  1:699291/101‑1
                                       GGCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAG                                  >  1:463428/1‑101
                                        GCCGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGA                                 <  2:1501350/101‑1
                                          CGGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACG                               <  1:388241/101‑1
                                           GGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGG                              <  1:1595789/101‑1
                                           GGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGG                              >  1:1128488/1‑101
                                           GGATAAGGCGCTCGTGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGG                              >  2:1323838/1‑101
                                           GGATAAGGCGCTCGGGCCGCATCCGGCATAAAAAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATTTGCCTTACCAGACGG                              >  2:676345/1‑101
                                                   cgctcgtGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCG                      <  1:1095218/94‑1
                                                     ctcgtGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTC                    <  1:1645679/96‑1
                                                       cgtGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTT                  <  2:843162/98‑1
                                                        gtGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTG                 <  1:233458/99‑1
                                                         tGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGC                >  1:63447/2‑101
                                                         tGCCGCATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGC                >  1:1589373/2‑101
                                                              CATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAA           <  2:1571550/101‑1
                                                              CATCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAA           <  1:258832/101‑1
                                                                TCCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGG         >  2:1373987/1‑101
                                                                 CCGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGG        <  1:459173/101‑1
                                                                  CGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGA       >  2:1658887/1‑101
                                                                  CGGCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGA       >  2:12467/1‑101
                                                                    GCATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATT     <  1:1564892/101‑1
                                                                     CATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTA    >  2:748184/1‑101
                                                                     CATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTA    <  1:1152900/101‑1
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   <  2:1512732/101‑1
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   >  2:1236065/1‑101
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   <  2:779828/101‑1
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   <  1:1221756/101‑1
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   <  1:384540/101‑1
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   <  1:382554/101‑1
                                                                      ATAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTAT   <  1:1168039/101‑1
                                                                       TAAACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTATG  >  1:1229466/1‑101
                                                                       ||                                                                                                   
CAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/71‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACAAAGCGCACTTTGCCAGAAATCCAGGCCCGCATTAAAAGCGGGCTTTTTTATGTGCCTTACCAGACGGGCATTTCGTCTTGCAGGAAGGGATTATG  >  37/1‑99

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.