New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 10 1 =0 (0.000)26 (0.620) 12/134 2.9 100% intergenic (–/–) –/– –/–
?210 = 2890 0 (0.000)intergenic (–/–) –/– –/–

AAGCGTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/132‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggataaggcgttcacgccgcatccggcaTAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGC  <  210/2890‑2791
                                                                                                                                                                                                                                        
AAGCGTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAG                                                                                                                                     <  1:71266/101‑1
AAGCGTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAG                                                                                                                                     <  2:461836/101‑1
 AGCGTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGG                                                                                                                                    <  2:1140000/101‑1
 AGCGTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGG                                                                                                                                    <  1:637380/101‑1
    GTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCG                                                                                                                                 >  2:775357/1‑101
     TTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGG                                                                                                                                >  1:1527737/1‑101
        ATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATA                                                                                                                             >  1:580367/1‑101
        ATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATA                                                                                                                             <  2:1123747/101‑1
        ATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATA                                                                                                                             <  1:528077/101‑1
         TCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAA                                                                                                                            <  2:1110886/101‑1
         TCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAA                                                                                                                            >  2:1084790/1‑101
                TGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTC                                                                                                                     <  1:225694/101‑1
                TGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTC                                                                                                                     >  1:90138/1‑101
                                                                 gatcgatCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCG                                                                    <  1:1122238/94‑1
                                                                   tcgatCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGAT                                                                  <  1:706701/96‑1
                                                                   tcgatCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGAT                                                                  >  1:1617195/6‑101
                                                                    cgatCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATG                                                                 >  1:1198453/5‑101
                                                                    cgatCAATTTATTGAATTTACACAATTTTGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAAATAAGCGCACTTTGTCAACAGTCTAGGCCGATG                                                                 >  1:1612974/5‑101
                                                                      atCAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGC                                                               >  1:1477743/3‑101
                                                                        CAATTTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCAT                                                             <  2:147317/101‑1
                                                                          attTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCA                                                           >  1:993044/4‑101
                                                                          attTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCA                                                           <  1:1543802/98‑1
                                                                          attTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCATTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCA                                                           <  2:511253/98‑1
                                                                            tTATTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACC                                                         >  2:429802/2‑101
                                                                               TTGAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATC                                                      <  2:1706331/101‑1
                                                                                 GAATTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGG                                                    <  1:881733/101‑1
                                                                                    TTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCC                                                 >  1:1613413/1‑101
                                                                                    TTTACACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCC                                                 >  1:1208580/1‑101
                                                                                     ttaCACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCAGCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCT                                                <  2:1365639/98‑1
                                                                                      taCACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTC                                               >  1:180076/3‑101
                                                                                       aCACAATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCT                                              <  1:898252/100‑1
                                                                                         acaATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTT                                            <  1:1126871/98‑1
                                                                                           aATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTT                                          >  1:175247/2‑101
                                                                                           aATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTT                                          >  1:66539/2‑101
                                                                                            ATTTTGTAGGGCGGATAAGCCGTTGACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCACCAGTCTAGCCCGATGGCATCGCCATCGGGCCTCTTTTTA                                         <  2:935029/101‑1
                                                                                            ATTTTGTAGGCGGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTA                                         <  1:1369469/101‑1
                                                                                            ATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTA                                         >  2:848937/1‑101
                                                                                              TTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATT                                       <  2:991461/101‑1
                                                                                              TTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATT                                       <  1:1207544/101‑1
                                                                                                      CCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCC                               >  2:1554939/1‑101
                                                                                                        GGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTG                             <  1:77952/101‑1
                                                                                                        GGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTG                             >  1:987059/1‑101
                                                                                                            agGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCCCTTTGTCAACAGTCTAGCCCGATGGCATCCCCATCGGGCCTCTTTTTATTTACTCTCCTGCGGC                         <  1:1296835/99‑1
                                                                                                             AGGCGTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCG                        <  2:1709307/101‑1
                                                                                                                 GTTCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAA                    >  1:143724/1‑101
                                                                                                                   TCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAAT                  <  1:1420236/101‑1
                                                                                                                   TCACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAAT                  <  1:537260/101‑1
                                                                                                                    CACGCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATG                 <  1:702779/101‑1
                                                                                                                     gaGCCGCATCCGCCATACACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCCCCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGT                <  1:351116/99‑1
                                                                                                                       GCCGCATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTG              >  2:342373/1‑101
                                                                                                                           CATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATC          <  1:165896/101‑1
                                                                                                                            ATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCG         >  1:1157689/1‑101
                                                                                                                            ATCCGGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCG         >  1:20073/1‑101
                                                                                                                                GGCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTG     <  1:487493/101‑1
                                                                                                                                 GCATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGC    <  1:800190/101‑1
                                                                                                                                   ATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGC  >  1:1379367/1‑101
                                                                                                                                   ATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGC  >  2:765288/1‑101
                                                                                                                                   ATAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGC  >  2:232918/1‑101
                                                                                                                                                                                                                                        
AAGCGTTAATCACTAATGACCAATGCCAAATAAGCCTGATGCGCTACACTTATCAGGCCTACAAGATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/132‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccggataaggcgttcacgccgcatccggcaTAAACTAAGCGCACTTTGTCAACAGTCTAGCCCGATGGCATCACCATCGGGCCTCTTTTTATTTACTCTCCTGCGGCGACAAATGTTGCATCGCCTGCGC  <  210/2890‑2791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.