| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 103802 | 108 (1.600) | 34 (0.650) +TTTGACAGCCGTTGTAGGCCTGAT |
22/152 | 1.8 | 45.3% | intergenic (–/–) | –/– | –/– |
| ? | 204 | = 4218 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/103757‑103802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCTGGGCA < 204/4218‑4119 |||||||||||||||||||||||| cctgtTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGT > 2:1006365/6‑101 ctgtTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTT < 2:1706186/97‑1 tTTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCC < 2:516410/100‑1 TTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCG > 2:950947/1‑101 TTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCG > 1:1609282/1‑101 tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGA > 1:206948/4‑101 tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAAT < 1:666826/100‑1 tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAAT < 1:370532/100‑1 gGATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCG < 2:288751/100‑1 ATGCGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTA < 1:797221/101‑1 CGGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAAC < 2:979670/101‑1 GGCGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACG > 1:135580/1‑101 CGTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCC < 2:1046239/101‑1 GTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCT > 1:706794/1‑101 GTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCT > 1:111604/1‑101 GTAAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCT > 2:753210/1‑101 AAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTA > 1:329580/1‑101 AAACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTA > 1:1097342/1‑101 AACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTAT > 1:162368/1‑101 AACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTAT < 1:685984/101‑1 AACGCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTAT < 2:1079908/101‑1 GCCTTATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCG > 2:36115/1‑101 TATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCC > 2:22351/1‑101 TATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCC > 1:672544/1‑101 TATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCC > 2:92173/1‑101 ATCCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCA > 2:1560112/1‑101 CCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGG > 1:958801/1‑101 CCGGCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGG > 1:1628434/1‑101 GCCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTT < 2:969153/101‑1 CCTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTT < 2:905706/101‑1 CTACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTG > 2:358167/1‑101 TACATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGC < 1:322196/101‑1 CATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTA > 1:339825/1‑101 CATTTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTA > 1:82595/1‑101 TTGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTA < 1:759051/101‑1 TGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTAC < 2:1210022/101‑1 TGACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTAC > 2:1155945/1‑101 GACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACC > 1:1017637/1‑101 GACAGCCGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTACTACC < 1:514349/101‑1 TTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATT > 2:169376/1‑101 TGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTT < 2:1075140/101‑1 TAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCC < 2:441071/101‑1 GGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCAT < 2:77501/101‑1 GGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCAT > 2:266804/1‑101 GGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCAT > 2:1305098/1‑101 CCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCT < 2:697100/101‑1 CCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCT > 1:1305641/1‑101 CCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCT > 1:427185/1‑101 CTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCTG > 1:568016/1‑101 TAAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCTGGGCA > 1:1152225/1‑101 |||||||||||||||||||||||| CATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/103757‑103802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGACGCGCAAGCGTCGCATCAGGCGTTGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCCCAGGTTTTGCTATTACCACCAGATTTCCATCTGGGCA < 204/4218‑4119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |