Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
MC JC | REL606 | 1,974,040 | Δ8,273 bp | IS1‑mediated | [yedU]–[yeeI] | [yedU], yedV, yedW, yedX, yedY, yedZ, yodA, yodB, serU, [yeeI] |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 1973327–1974039 | 1982312 | 8274–8986 | 22 [20] | [0] 86 | [insA‑13]–[yeeI] | [insA‑13],insB‑13,yedU,yedV,yedW,yedX,yedY,yedZ,yodA,yodB,serU,[yeeI] |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1974039 | NA (NA) | 85 (1.320) | 63/200 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
? | REL606 | 1982313 = | 0 (0.000) | coding (664/798 nt) | yeeI | hypothetical protein |
GAAGAAATCGAATTGGTTGGCGAGAATGCGGCGAGCATTGATGCTTATGCTGCCAGTGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGA > REL606/1982214‑1982413 | cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAg > 1:968830‑M2/100‑101 (MQ=255) cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAg < 2:747499‑M2/2‑1 (MQ=255) gtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGccc > 2:1143637‑M2/95‑101 (MQ=255) cgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCa < 1:653226‑M2/9‑1 (MQ=255) ctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGa > 1:194551‑M2/91‑101 (MQ=255) tgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGaa > 2:1281390‑M2/90‑101 (MQ=255) gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAAc > 2:362927‑M2/89‑101 (MQ=255) gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAAc > 2:1282409‑M2/89‑101 (MQ=255) tcgttctcaaaatcggtggaggtgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACt < 2:922743‑M2/14‑1 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACttt > 2:411473‑M2/86‑101 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACttt < 2:787348‑M2/16‑1 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACttt > 2:1314717‑M2/86‑101 (MQ=255) ttctcaaaatcggtggagctgcatgaaaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACtttt > 2:886758‑M2/85‑101 (MQ=255) tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACttttt < 2:635126‑M2/18‑1 (MQ=255) tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACttttt < 2:591383‑M2/18‑1 (MQ=255) ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTg > 2:724355‑M2/83‑101 (MQ=255) aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGctcc > 2:17999‑M2/79‑101 (MQ=255) atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGctcctc > 1:648177‑M2/77‑101 (MQ=255) ggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGtt > 1:319388‑M2/74‑101 (MQ=255) agctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCt > 2:688371‑M2/69‑101 (MQ=255) gctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCtt < 2:1199111‑M2/34‑1 (MQ=255) tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCa > 2:1336220‑M2/66‑101 (MQ=255) tgcatgacaaagtcatcgggcattatctgaacataaaaaactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTGTCCCTTCa > 2:538309‑M2/66‑101 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCAt > 2:708018‑M2/65‑101 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCAt > 1:1515995‑M2/65‑101 (MQ=255) atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATtg > 1:874982‑M2/63‑101 (MQ=255) tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATtgt < 1:1635313‑M2/40‑1 (MQ=255) gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATtgtg > 1:1263657‑M2/61‑101 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCa > 1:97352‑M2/58‑101 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCa > 2:742308‑M2/58‑101 (MQ=255) agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAc < 2:1657733‑M2/46‑1 (MQ=255) gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACg < 1:1530667‑M2/47‑1 (MQ=255) catcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGtt > 1:778737‑M2/53‑101 (MQ=255) catcgggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGtt > 1:1541193‑M2/53‑101 (MQ=255) tcgggcattatctgaacataaaacactatcaataagttggagtcattcccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTc < 2:1365071‑M2/51‑1 (MQ=255) ggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGc > 2:762463‑M2/48‑101 (MQ=255) ggcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGc > 1:1170561‑M2/48‑101 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGcc < 1:906601‑M2/55‑1 (MQ=255) cattatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCa > 2:1046993‑M2/46‑101 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGTTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCaa > 2:1115395‑M2/45‑101 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCaa > 2:508620‑M2/45‑101 (MQ=255) ttatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAAt > 2:1012856‑M2/44‑101 (MQ=255) tatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAAtt < 1:839719‑M2/59‑1 (MQ=255) tatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAAtt < 2:161210‑M2/59‑1 (MQ=255) tatctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAAtt > 1:1324195‑M2/43‑101 (MQ=255) atctgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAAttt > 2:1277237‑M2/42‑101 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTAt > 1:249189‑M2/39‑101 (MQ=255) aacataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATca < 1:467405‑M2/65‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATcaac > 2:929934‑M2/35‑101 (MQ=255) cataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATcaac > 2:1645107‑M2/35‑101 (MQ=255) cataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATcaac < 2:1407365‑M2/67‑1 (MQ=255) ataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATcaaca > 2:387982‑M2/34‑101 (MQ=255) ataaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATcaaca > 2:1598937‑M2/34‑101 (MQ=255) taaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATcaacaa > 2:1657116‑M2/33‑101 (MQ=255) aaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAg < 1:1182529‑M2/70‑1 (MQ=255) aaaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAg < 1:907818‑M2/70‑1 (MQ=255) aaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGa < 1:1282414‑M2/71‑1 (MQ=255) aaacactatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGa > 1:1189389‑M2/31‑101 (MQ=255) actatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCt > 1:141797‑M2/27‑101 (MQ=255) ctatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTCTGGCAACGTTTCTGCCAATTTTATCAACACCATCCtt > 2:398038‑M2/26‑101 (MQ=255) tatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCttt > 1:302175‑M2/25‑101 (MQ=255) tatcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCttt > 2:1603327‑M2/25‑101 (MQ=255) atcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTg > 1:1347999‑M2/24‑101 (MQ=255) tcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGc > 2:1372329‑M2/23‑101 (MQ=255) tcaataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAANTTTATCAACAAGATCCTTTGc > 2:197534‑M2/23‑101 (MQ=255) caataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCt > 1:83907‑M2/22‑101 (MQ=255) aataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTg > 1:1011040‑M2/21‑101 (MQ=255) ataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTga > 1:1423644‑M2/20‑101 (MQ=255) ataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTga > 2:882541‑M2/20‑101 (MQ=255) ataagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTga > 1:1616065‑M2/20‑101 (MQ=255) taagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTgag > 2:292914‑M2/19‑101 (MQ=255) aagttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTgaga > 1:1353830‑M2/18‑101 (MQ=255) agttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGAc < 2:1249183‑M2/85‑1 (MQ=255) agttggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGAc < 2:874977‑M2/85‑1 (MQ=255) tggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGc > 2:1713353‑M2/14‑101 (MQ=255) ggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCa > 1:1290151‑M2/13‑101 (MQ=255) ggagtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCa > 2:1013837‑M2/13‑101 (MQ=255) agtcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATc < 1:398043‑M2/91‑1 (MQ=255) tcattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCAc < 1:1012861‑M2/93‑1 (MQ=255) cattaccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACg > 2:1674702‑M2/8‑101 (MQ=255) taccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTa < 1:688376‑M2/97‑1 (MQ=255) ccAGCGCCCCAGATCTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAAt < 1:1004588‑M2/99‑1 (MQ=255) ccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAAt < 1:708023‑M2/99‑1 (MQ=255) ccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAAt < 1:1543135‑M2/99‑1 (MQ=255) ccAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAAt < 1:362927‑M2/99‑1 (MQ=255) aGCGCCCCAGAGCTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGa < 1:743295/101‑1 (MQ=255) | GAAGAAATCGAATTGGTTGGCGAGAATGCGGCGAGCATTGATGCTTATGCTGCCAGTGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCTGAGACTGCATCACGCTAATGA > REL606/1982214‑1982413 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |