Predicted mutation
evidence seq id position mutation annotation gene description
MC JC JC REL606 2,397,529 IS150 (–) Δ14 bp coding (1124‑1137/2646 nt) yfcTU ← predicted outer membrane export usher protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 2397529 2397542 14 66 [0] [0] 89 yfcTU predicted outer membrane export usher protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 23975280 (0.000)64 (1.000) 48/198 0.3 100% coding (1138/2646 nt) yfcTU predicted outer membrane export usher protein
?REL606 2774435 = NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? REL606 2397543 =0 (0.000)88 (1.400) 66/196 0.0 100% coding (1123/2646 nt) yfcTU predicted outer membrane export usher protein
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region

TATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTC  >  REL606/2774336‑2774531
                                                                                                   |                                                                                                
tATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg                                                                                                 >  2:1089124/1‑101 (MQ=255)
tATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTg                                                                                                 >  2:1056920/1‑101 (MQ=255)
  tGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa                                                                                               <  2:246774/101‑1 (MQ=255)
  tGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTa                                                                                               <  2:1177035/101‑1 (MQ=255)
   gATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                              <  1:962564/101‑1 (MQ=255)
   gATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTAc                                                                                              <  2:950275/101‑1 (MQ=255)
    aTTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt                                                                                             >  2:1338936/1‑101 (MQ=255)
    aTTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt                                                                                             <  1:122185/101‑1 (MQ=255)
    aTTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACt                                                                                             >  1:1352594/1‑101 (MQ=255)
      tGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGa                                                                                           >  2:600894/1‑101 (MQ=255)
      tGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGa                                                                                           >  1:475468/1‑101 (MQ=255)
       gCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGAc                                                                                          <  1:873982/101‑1 (MQ=255)
            aaGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaa                                                                                     >  2:115304/1‑101 (MQ=255)
              gggCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa                                                                                   <  2:908716/101‑1 (MQ=255)
              gggCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaa                                                                                   <  1:92841/101‑1 (MQ=255)
               ggCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCaaaaa                                                                                  <  2:8289/101‑1 (MQ=255)
                  atatTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt                                                                               >  2:1523895/1‑101 (MQ=255)
                  atatTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt                                                                               >  1:578942/1‑101 (MQ=255)
                  atatTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGtt                                                                               >  2:366113/1‑101 (MQ=255)
                   tatTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTg                                                                              >  2:625310/1‑101 (MQ=255)
                    atTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg                                                                             >  1:1414273/1‑101 (MQ=255)
                    atTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg                                                                             >  1:230158/1‑101 (MQ=255)
                    atTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTgg                                                                             >  2:306276/1‑101 (MQ=255)
                      tttGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc                                                                           <  2:1123374/101‑1 (MQ=255)
                      tttGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGAc                                                                           >  1:679550/1‑101 (MQ=255)
                        tGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAg                                                                         <  1:1621293/101‑1 (MQ=255)
                         gTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGt                                                                        <  1:1099545/101‑1 (MQ=255)
                           cAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTa                                                                      <  1:1607422/101‑1 (MQ=255)
                              cATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAac                                                                   <  2:1713502/101‑1 (MQ=255)
                              cATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAac                                                                   <  2:1362544/101‑1 (MQ=255)
                              cATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAac                                                                   >  2:785237/1‑101 (MQ=255)
                               aTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAaca                                                                  <  2:1280229/101‑1 (MQ=255)
                                tGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAacac                                                                 <  1:1477064/101‑1 (MQ=255)
                                tGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAacac                                                                 >  1:149271/1‑101 (MQ=255)
                                tGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAacac                                                                 <  1:654631/101‑1 (MQ=255)
                                tGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAacac                                                                 <  1:665006/101‑1 (MQ=255)
                                   cTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAg                                                              >  1:1182339/1‑101 (MQ=255)
                                   cTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAg                                                              >  2:1593668/1‑101 (MQ=255)
                                    ttGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAgg                                                             >  2:1510811/1‑101 (MQ=255)
                                     tGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGc                                                            <  1:405910/101‑1 (MQ=255)
                                      gCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCa                                                           <  1:1438549/101‑1 (MQ=255)
                                       ccTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCat                                                          <  1:863274/101‑1 (MQ=255)
                                       ccTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCat                                                          >  2:578827/1‑101 (MQ=255)
                                       ccTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCat                                                          <  2:1706769/101‑1 (MQ=255)
                                       ccTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCat                                                          >  1:971851/1‑101 (MQ=255)
                                         tCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCatat                                                        <  2:578937/101‑1 (MQ=255)
                                          cccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAtata                                                       <  1:498361/101‑1 (MQ=255)
                                          cccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAtata                                                       <  2:988039/101‑1 (MQ=255)
                                           ccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAg                                                      <  1:1092338/101‑1 (MQ=255)
                                            cTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAgg                                                     <  1:222786/101‑1 (MQ=255)
                                            cTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAgg                                                     >  1:468156/1‑101 (MQ=255)
                                            cTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAgg                                                     >  1:344822/1‑101 (MQ=255)
                                             tGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGt                                                    <  1:739397/101‑1 (MQ=255)
                                              gCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTc                                                   <  2:471722/101‑1 (MQ=255)
                                                aaaGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTg                                                 >  1:1513783/1‑101 (MQ=255)
                                                aaaGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTg                                                 >  1:314435/1‑101 (MQ=255)
                                                aaaGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTg                                                 >  2:241608/1‑101 (MQ=255)
                                                  agaagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGAt                                               >  2:41015/1‑101 (MQ=255)
                                                    aagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTc                                             >  1:990278/1‑101 (MQ=255)
                                                    aagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTc                                             >  1:1153224/1‑101 (MQ=255)
                                                    aagaGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTc                                             <  2:999709/101‑1 (MQ=255)
                                                     agagACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTcc                                            >  2:403323/1‑101 (MQ=255)
                                                     agagACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTcc                                            >  1:111646/1‑101 (MQ=255)
                                                        gaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGat                                         >  2:420871/1‑101 (MQ=255)
                                                        gaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGat                                         >  2:555599/1‑101 (MQ=255)
                                                        gaCTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGat                                         <  2:754011/101‑1 (MQ=255)
                                                          cTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGCTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGatat                                       >  1:1544312/1‑101 (MQ=255)
                                                              cATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCaa                                   <  1:1089129/101‑1 (MQ=255)
                                                              cATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCaa                                   >  2:77007/1‑101 (MQ=255)
                                                               aTTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAt                                  <  1:366113/101‑1 (MQ=255)
                                                               aTTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAt                                  >  1:16969/1‑101 (MQ=255)
                                                                ttCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAtt                                 <  1:785242/101‑1 (MQ=255)
                                                                ttCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAtt                                 <  1:1338942/101‑1 (MQ=255)
                                                                ttCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAAtt                                 >  1:1693093/1‑101 (MQ=255)
                                                                  cGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTgg                               <  1:600899/101‑1 (MQ=255)
                                                                  cGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTgg                               <  2:1352588/101‑1 (MQ=255)
                                                                    aaTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAg                             >  1:1253928/1‑101 (MQ=255)
                                                                     aTTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGt                            >  2:468355/1‑101 (MQ=255)
                                                                      ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTc                           >  1:900165/1‑101 (MQ=255)
                                                                      ttGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTc                           <  1:1046618/101‑1 (MQ=255)
                                                                         tttGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGa                        >  1:1006649/1‑101 (MQ=255)
                                                                           tGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGAcc                      <  2:192186/101‑1 (MQ=255)
                                                                             ggTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCtt                    <  1:578832/101‑1 (MQ=255)
                                                                              gTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCttt                   >  2:852020/1‑101 (MQ=255)
                                                                              gTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCttt                   >  1:1097497/1‑101 (MQ=255)
                                                                                tCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTa                 >  1:1663180/1‑101 (MQ=255)
                                                                                tCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTa                 <  1:1064330/101‑1 (MQ=255)
                                                                                 cGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTaa                <  1:69875/101‑1 (MQ=255)
                                                                                  gAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAt               >  2:976078/1‑101 (MQ=255)
                                                                                    aCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAttt             <  1:1468886/101‑1 (MQ=255)
                                                                                    aCGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAAttt             <  2:551545/101‑1 (MQ=255)
                                                                                      gTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTcn           <  1:643925/101‑2 (MQ=40)
                                                                                       tAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAg          <  1:253810/101‑1 (MQ=38)
                                                                                        aaGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAgg         >  2:282166/1‑101 (MQ=38)
                                                                                          gCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCt       <  1:1523901/101‑1 (MQ=35)
                                                                                             tCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAt    <  1:625315/101‑1 (MQ=33)
                                                                                              cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAtt   >  1:447955/1‑101 (MQ=32)
                                                                                              cAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAtt   <  2:1513777/101‑1 (MQ=32)
                                                                                               aGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAAttc  >  2:679751/1‑101 (MQ=32)
                                                                                                   |                                                                                                
TATGATTGCCACAAGGGCATATTTTGTCAGCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGTAAGCCTCAGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGACCTTTTAATTTCAGGCTAATTC  >  REL606/2774336‑2774531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.