| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | REL606 | 1,879,026 | T→A | 100% | D380V (GAT→GTT) | yoaE ← | fused predicted membrane protein/conserved protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 1,879,026 | 0 | T | A | 100.0% | 336.6 / NA | 97 | D380V (GAT→GTT) | yoaE | fused predicted membrane protein/conserved protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (56/41); total (56/41) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 104 total aligned reads displayed.
ACAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAATCGCC > REL606/1878978‑1879073 | aCAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTgatcggaacg < 1:244010/51‑1 (MQ=255) cAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGa < 1:9856139/51‑1 (MQ=255) cAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGa > 1:9633935/1‑51 (MQ=255) cAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGa < 1:458921/51‑1 (MQ=255) cAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGa > 1:2436575/1‑51 (MQ=255) aaaGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAg > 1:10055032/1‑51 (MQ=255) aaaGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAg > 1:9839353/1‑51 (MQ=255) aaaGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAg > 1:7237497/1‑51 (MQ=255) cTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGtt < 1:3564254/51‑1 (MQ=255) cTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGtt < 1:5512147/51‑1 (MQ=255) cTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGtt > 1:7686382/1‑51 (MQ=255) tCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGttt > 1:6486231/1‑51 (MQ=255) tCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGttt > 1:641787/1‑51 (MQ=255) tCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGttt > 1:4991547/1‑51 (MQ=255) tCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGttt > 1:4855555/1‑51 (MQ=255) tCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGttt > 1:1995891/1‑51 (MQ=255) cccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAggg < 1:7933832/47‑1 (MQ=255) cccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTc > 1:10713973/1‑51 (MQ=255) cccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTc < 1:5082906/51‑1 (MQ=255) ccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTcc < 1:10242996/51‑1 (MQ=255) ccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTcc > 1:5876242/1‑51 (MQ=255) ccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTcc > 1:2286447/1‑51 (MQ=255) ccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTcc > 1:526416/1‑51 (MQ=255) ccGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTcc > 1:2973525/1‑51 (MQ=255) gcgAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCgg < 1:8149074/51‑1 (MQ=255) cgAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCggg < 1:5173163/51‑1 (MQ=255) cgAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCggg < 1:7092826/51‑1 (MQ=255) gAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGa > 1:4350519/1‑51 (MQ=255) gAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGa > 1:1559884/1‑51 (MQ=255) gAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGa > 1:5709547/1‑51 (MQ=255) gAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGa > 1:6880931/1‑51 (MQ=255) gAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGa < 1:4781602/51‑1 (MQ=255) aGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGAc < 1:9588887/51‑1 (MQ=255) aGCGCGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGAc > 1:306078/1‑51 (MQ=255) gcgcGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACg < 1:5965804/51‑1 (MQ=255) gcgcGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACg > 1:5397675/1‑51 (MQ=255) gcgcGACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACg < 1:5771763/51‑1 (MQ=255) cgcgACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGa > 1:2202196/1‑51 (MQ=255) gcgACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGa > 1:3550430/1‑50 (MQ=255) gcgACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGAt > 1:538130/1‑51 (MQ=255) gcgACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGAt < 1:4220294/51‑1 (MQ=255) gACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATaa < 1:2981114/51‑1 (MQ=255) gACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATaa > 1:8740533/1‑51 (MQ=255) gACGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATaa > 1:7725863/1‑51 (MQ=255) aCGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAAt > 1:3419423/1‑51 (MQ=255) aCGCAGCACGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAAt > 1:7574848/1‑51 (MQ=255) gcagcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCg > 1:1756564/1‑51 (MQ=255) gcagcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCg < 1:9299055/51‑1 (MQ=255) gcagcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCg < 1:8078035/51‑1 (MQ=255) gcagcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCg > 1:6510247/1‑51 (MQ=255) cagcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGc < 1:7370666/51‑1 (MQ=255) cagcaCGCCCAGCAGGGTGATCGGAACGAGGGTTTCCGGGACGATAATCGc > 1:1726550/1‑51 (MQ=38) agcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATa > 1:8383436/1‑45 (MQ=255) agcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGcc < 1:3166240/51‑1 (MQ=255) gcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCg < 1:7561444/51‑1 (MQ=255) gcaCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCg > 1:6135533/1‑51 (MQ=255) caCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCgg > 1:4720748/1‑51 (MQ=255) caCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCgg > 1:2705077/1‑51 (MQ=255) aCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGga < 1:638619/51‑1 (MQ=255) aCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGga > 1:3961823/1‑51 (MQ=255) aCGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGga > 1:4732462/1‑51 (MQ=255) cGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGc < 1:1070960/46‑1 (MQ=255) cGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGgag < 1:3145973/51‑1 (MQ=255) cGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGgag < 1:2213699/51‑1 (MQ=255) cGCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGgag < 1:3280839/51‑1 (MQ=255) gCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGgaga > 1:9365641/1‑51 (MQ=255) gCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGgaga > 1:3317366/1‑51 (MQ=255) gCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGgaga > 1:4961823/1‑51 (MQ=255) gCCCAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGga < 1:3857579/49‑1 (MQ=255) cccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGAc > 1:9201507/1‑51 (MQ=255) cccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGAc < 1:10340877/51‑1 (MQ=255) ccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAAt > 1:3278832/1‑40 (MQ=255) ccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACg < 1:10097741/51‑1 (MQ=255) ccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACg > 1:5955024/1‑51 (MQ=255) ccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACg > 1:4633680/1‑51 (MQ=255) ccAGCAGGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACg > 1:9232242/1‑51 (MQ=255) agcagGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGcc < 1:2356316/51‑1 (MQ=255) agcagGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGcc < 1:2257090/51‑1 (MQ=255) agcagGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGcc < 1:5803275/51‑1 (MQ=255) agcagGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGcc > 1:1666786/1‑51 (MQ=255) cagGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGa > 1:5569580/1‑51 (MQ=255) cagGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGa > 1:8076881/1‑51 (MQ=255) agGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGaa < 1:10453366/51‑1 (MQ=255) agGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGaa < 1:6807338/51‑1 (MQ=255) agGTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGaa < 1:311085/51‑1 (MQ=255) ggTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAg < 1:3383090/51‑1 (MQ=255) ggTTGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAg > 1:9694551/1‑51 (MQ=255) ttGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCa < 1:2827443/51‑1 (MQ=255) ttGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCa > 1:1801085/1‑51 (MQ=255) ttGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCa > 1:1465358/1‑51 (MQ=255) ttGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCa > 1:3834884/1‑51 (MQ=255) tGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCaa > 1:7772412/1‑51 (MQ=255) tGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCaa > 1:9799309/1‑51 (MQ=255) tGATCGGAACGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCaa < 1:7295761/51‑1 (MQ=255) gatcggaacgAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAAt > 1:50334/1‑51 (MQ=255) atcggaacgAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAATc > 1:1926999/1‑51 (MQ=255) tcggaacgAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAATcg < 1:1829379/51‑1 (MQ=255) cggaacgAGGGTTTCCGGGACGATAATCGCCGGAGACGCTGAAGCAATcgc > 1:1081983/1‑51 (MQ=38) cggaacgAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAATcgc > 1:5920859/1‑51 (MQ=255) ggaacgAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAATcgcc > 1:142288/1‑51 (MQ=255) | ACAAAGCTCCCGCGAGCGCGACGCAGCACGCCCAGCAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGACGCCGAAGCAATCGCC > REL606/1878978‑1879073 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |