Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 16975 18001 1027 125 [0] [0] 110 [nhaA] [nhaA]

Only 100 of 125 total aligned reads displayed.

CGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTTGATAGTAAAATATCACTCGGGGCTTTTCTCTATCTGCCGTTCAGCTAA  >  REL606/16924‑17023
                                                  |                                                 
cGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGt                                                   <  1:9764707/51‑1 (MQ=255)
cGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGt                                                   >  1:10118917/1‑51 (MQ=255)
 ggTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTt                                                  <  1:176623‑M1/51‑2 (MQ=255)
  gTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtg                                                 >  1:4193822‑M1/1‑49 (MQ=255)
   tCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgt                                                <  1:8999844‑M1/51‑4 (MQ=255)
   tCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgt                                                >  1:5323465‑M1/1‑48 (MQ=255)
   tCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgt                                                >  1:5989096‑M1/1‑48 (MQ=255)
    cAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgta                                               >  1:1336212‑M1/1‑47 (MQ=255)
    cAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgta                                               >  1:9289479‑M1/1‑47 (MQ=255)
     aGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtac                                              >  1:7641410‑M1/1‑46 (MQ=255)
     aGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtac                                              >  1:3197747‑M1/1‑46 (MQ=255)
      gTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtact                                             <  1:1605510‑M1/51‑7 (MQ=255)
       tAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactg                                            >  1:8146598‑M1/1‑44 (MQ=255)
       tAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactg                                            >  1:1751578‑M1/1‑44 (MQ=255)
       tAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactg                                            <  1:5485048‑M1/51‑8 (MQ=255)
        aaGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactga                                           >  1:7764242‑M1/1‑43 (MQ=255)
        aaGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactga                                           >  1:5120035‑M1/1‑43 (MQ=255)
        aaGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactga                                           >  1:7086843‑M1/1‑43 (MQ=255)
         agagGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgac                                          >  1:2892050‑M1/1‑42 (MQ=255)
          gagGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgacc                                         >  1:1668408‑M1/1‑41 (MQ=255)
          gagGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgacc                                         >  1:8725966‑M1/1‑41 (MQ=255)
           agGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccc                                        >  1:4414341‑M1/1‑40 (MQ=255)
             gCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgacccca                                      <  1:2434733‑M1/51‑14 (MQ=255)
             gCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgacccca                                      >  1:9408634‑M1/1‑38 (MQ=255)
              cACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaa                                     >  1:9095115‑M1/1‑37 (MQ=255)
              cACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaa                                     <  1:10816015‑M1/51‑15 (MQ=255)
               aCTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaa                                    >  1:2034469‑M1/1‑36 (MQ=255)
               aCTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaa                                    >  1:7361861‑M1/1‑36 (MQ=255)
               aCTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaa                                    >  1:7422697‑M1/1‑36 (MQ=255)
                ctctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaana                                   <  1:67997‑M1/51‑17 (MQ=255)
                ctctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaa                                   >  1:6596326‑M1/1‑35 (MQ=255)
                 tctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaa                                  <  1:3725290‑M1/51‑18 (MQ=255)
                 tctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaa                                  >  1:2216265‑M1/1‑34 (MQ=255)
                 tctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaa                                  >  1:8531344‑M1/1‑34 (MQ=255)
                  ctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaag                                 >  1:5016249‑M1/1‑33 (MQ=255)
                  ctACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaag                                 <  1:6092822‑M1/51‑19 (MQ=255)
                   tACATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagt                                >  1:4645002‑M1/1‑32 (MQ=255)
                     cATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttg                              >  1:5817789‑M1/1‑30 (MQ=255)
                     cATGTGTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttg                              >  1:10083464‑M1/1‑30 (MQ=255)
                       tgtgTTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttgga                            >  1:7066337‑M1/1‑28 (MQ=255)
                        gtgtTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggac                           >  1:2220849‑M1/1‑27 (MQ=255)
                         tgtTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggaca                          <  1:8572890‑M1/51‑26 (MQ=255)
                         tgtTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggaca                          >  1:246320‑M1/1‑26 (MQ=255)
                          gtTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacag                         >  1:276559‑M1/1‑25 (MQ=255)
                          gtTCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggaca                          <  1:5606207‑M1/50‑26 (MQ=255)
                            tCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtt                       >  1:4116632‑M1/1‑23 (MQ=255)
                            tCAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtt                       >  1:7551162‑M1/1‑23 (MQ=255)
                             cAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtta                      <  1:5943639‑M1/51‑30 (MQ=255)
                             cAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtta                      <  1:7354087‑M1/51‑30 (MQ=255)
                             cAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtta                      <  1:2398775‑M1/51‑30 (MQ=255)
                             cAGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagtta                      >  1:2946194‑M1/1‑22 (MQ=255)
                              aGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                     <  1:10235998‑M1/51‑31 (MQ=255)
                              aGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                     >  1:3427755‑M1/1‑21 (MQ=255)
                              aGCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                     >  1:5599852‑M1/1‑21 (MQ=255)
                               gCATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaa                    <  1:6221948‑M1/51‑32 (MQ=255)
                                cATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaac                   <  1:2422622‑M1/51‑33 (MQ=255)
                                cATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaac                   >  1:8581190‑M1/1‑19 (MQ=255)
                                cATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaac                   >  1:5839960‑M1/1‑19 (MQ=255)
                                cATATAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaac                   <  1:4257411‑M1/51‑33 (MQ=255)
                                 atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaana                  <  1:2106667‑M1/51‑34 (MQ=255)
                                 atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaaca                  <  1:10059291‑M1/51‑34 (MQ=255)
                                 atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaaca                  >  1:148937‑M1/1‑18 (MQ=255)
                                 atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaaca                  >  1:1489958‑M1/1‑18 (MQ=255)
                                 atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaaca                  <  1:3478615‑M1/51‑34 (MQ=255)
                                 atatAGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaaca                  >  1:1543175‑M1/1‑18 (MQ=255)
                                  tataGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacac                 <  1:2995240‑M1/51‑35 (MQ=255)
                                  tataGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacac                 <  1:7616801‑M1/51‑35 (MQ=255)
                                   ataGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacg                <  1:7515087‑M1/51‑36 (MQ=255)
                                   ataGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                     >  1:6640044‑M1/1‑16 (MQ=255)
                                   ataGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaa                     >  1:891605‑M1/1‑16 (MQ=255)
                                    taGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacga               <  1:192366‑M1/51‑37 (MQ=255)
                                    taGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacga               >  1:8110944‑M1/1‑15 (MQ=255)
                                    taGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacga               >  1:400007‑M1/1‑15 (MQ=255)
                                     aGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgag              <  1:3404496‑M1/51‑38 (MQ=255)
                                     aGGGGGCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgag              >  1:665343‑M1/1‑14 (MQ=255)
                                      gggggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgagg             >  1:626840‑M1/1‑13 (MQ=255)
                                       ggggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggc            <  1:7187195‑M1/51‑40 (MQ=255)
                                         ggCCTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcat          >  1:583960‑M1/1‑10 (MQ=255)
                                           ccTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatat        <  1:9589289‑M1/51‑44 (MQ=255)
                                            cTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatata       >  1:10720310‑M1/1‑7 (MQ=255)
                                            cTCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatata       >  1:1431312‑M1/1‑7 (MQ=255)
                                             tCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag      >  1:4447516‑M1/1‑6 (MQ=255)
                                             tCGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag      >  1:9437405‑M1/1‑6 (MQ=255)
                                              cGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg     >  1:8186360‑M1/1‑5 (MQ=255)
                                              cGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg     >  1:3158490‑M1/1‑5 (MQ=255)
                                              cGGGTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg     >  1:458167‑M1/1‑5 (MQ=255)
                                               gggTtgtactgccccaaaaaagttggacagttaaacacgaggca           <  1:2351135‑M1/44‑41 (MQ=255)
                                               gggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt    >  1:895564‑M1/1‑4 (MQ=255)
                                               gggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt    >  1:4853143‑M1/1‑4 (MQ=255)
                                               gggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt    >  1:9425930‑M1/1‑4 (MQ=255)
                                                ggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc   >  1:4449952‑M1/1‑3 (MQ=255)
                                                ggTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc   <  1:9758482‑M1/51‑49 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  <  1:7985768‑M1/51‑50 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  >  1:3173242‑M1/1‑2 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  >  1:3465359‑M1/1‑2 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  <  1:5043055‑M1/51‑50 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  >  1:4603147‑M1/1‑2 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  >  1:9689436‑M1/1‑2 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtct  <  1:4647697‑M1/51‑50 (MQ=255)
                                                 gTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt    <  1:7131795‑M1/49‑48 (MQ=255)
                                                  |                                                 
CGGTCAGTAAGAGGCACTCTACATGTGTTCAGCATATAGGGGGCCTCGGGTTGATAGTAAAATATCACTCGGGGCTTTTCTCTATCTGCCGTTCAGCTAA  >  REL606/16924‑17023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: