| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | 100% | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 76 (0.800) | 50/80 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1354425 = | 0 (0.000) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
| * | ? | REL606 | = 666130 | NA (NA) | 98 (1.060) | 54/78 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1354427 | 0 (0.000) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
Only 100 of 219 total aligned reads displayed.
AACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCG > REL606/1354377‑1354476 | aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTg < 1:1452841/51‑1 (MQ=255)aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTg > 1:5439725/1‑51 (MQ=255)aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGCAATTTTAGCCTCGTTg > 1:2268984/1‑51 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTc < 1:532359‑M2/5‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTc > 1:1779611‑M2/47‑51 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:3891420‑M2/46‑51 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:3464636‑M2/46‑51 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:7228271‑M2/46‑51 (MQ=255) tGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgt > 1:6165752‑M2/1‑48 (MQ=255) tGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgt > 1:860659‑M2/1‑48 (MQ=255) gTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgta > 1:5011888‑M2/1‑47 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAg > 1:2060473‑M2/43‑51 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAgg < 1:2492327‑M2/10‑1 (MQ=255) cgcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactg > 1:7905674‑M2/1‑44 (MQ=255) cgcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactg < 1:3166403‑M2/51‑8 (MQ=255) cgcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactg > 1:2321664‑M2/1‑44 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc > 1:5044745‑M2/41‑51 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc < 1:3054948‑M2/11‑1 (MQ=255) cgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgac > 1:10583163‑M2/1‑42 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:8885101‑M2/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:6477059‑M2/14‑1 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCAc > 1:8549654‑M2/37‑51 (MQ=255) gATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgacccc < 1:10031605‑M2/51‑13 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACg > 1:965538‑M2/36‑51 (MQ=255) aTTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgacccc > 1:10863577‑M2/1‑38 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGa < 1:8190076‑M2/17‑1 (MQ=255) ttCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaa < 1:514344‑M2/51‑16 (MQ=255) ttCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaa < 1:1144791‑M2/51‑16 (MQ=255) tCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaa > 1:10752618‑M2/1‑35 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc > 1:6445001‑M2/32‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc > 1:5943965‑M2/32‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc < 1:1891893‑M2/20‑1 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcg > 1:7779158‑M2/31‑51 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcg > 1:8372239‑M2/31‑51 (MQ=255) gCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaag < 1:5071475‑M2/51‑19 (MQ=255) cGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagtt < 1:6322471‑M2/51‑21 (MQ=255) cGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagtt > 1:8844503‑M2/1‑31 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcgcgc < 1:3644689‑M2/24‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGcgcgcg < 1:10769776‑M2/25‑1 (MQ=255) gATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttgg < 1:3804068‑M2/51‑23 (MQ=255) gATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttgg < 1:417518‑M2/51‑23 (MQ=255) aTTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttgg < 1:6627992‑M2/50‑23 (MQ=255) ttGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggac > 1:3999172‑M2/1‑27 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGt > 1:6354751‑M2/25‑51 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGt > 1:5171413‑M2/25‑51 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGt < 1:1737640‑M2/27‑1 (MQ=255) tccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTa > 1:9563864‑M2/24‑51 (MQ=255) gTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacag < 1:921603‑M2/51‑27 (MQ=255) ccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaa > 1:2969226‑M2/23‑51 (MQ=255) tATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagt > 1:5993365‑M2/1‑24 (MQ=255) tATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagt < 1:3310550‑M2/51‑28 (MQ=255) tATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagt < 1:2423144‑M2/51‑28 (MQ=255) caacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaaa < 1:6897361‑M2/30‑1 (MQ=255) caacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaaa < 1:9590799‑M2/30‑1 (MQ=255) caacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaaa > 1:7506553‑M2/22‑51 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt > 1:568232‑M2/1‑23 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:10905716‑M2/51‑29 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:1099345‑M2/51‑29 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:8268090‑M2/51‑29 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:3249429‑M2/51‑29 (MQ=255) ttCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtta > 1:4774294‑M2/1‑22 (MQ=255) ttCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtta < 1:9481974‑M2/51‑30 (MQ=255) ttCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtta < 1:6219388‑M2/51‑30 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:550877‑M2/51‑31 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:9627274‑M2/51‑31 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:2138776‑M2/51‑31 (MQ=255) caaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATa < 1:7148003‑M2/33‑1 (MQ=255) caaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATa > 1:2611600‑M2/19‑51 (MQ=255) gTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaaca > 1:4316757‑M2/1‑18 (MQ=255) aatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATagag > 1:7761478‑M2/16‑51 (MQ=255) tAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacac < 1:3286350‑M2/51‑35 (MQ=255) tgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgc > 1:6578516‑M2/14‑51 (MQ=255) aaTTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacg > 1:9101970‑M2/1‑16 (MQ=255) gggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgcc > 1:10218943‑M2/13‑51 (MQ=255) gggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgcc < 1:5448745‑M2/39‑1 (MQ=255) ttttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgag < 1:2846653‑M2/51‑38 (MQ=255) ggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccg < 1:10380001‑M2/40‑1 (MQ=255) tttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgagg < 1:6791336‑M2/51‑39 (MQ=255) tttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgagg < 1:4679515‑M2/51‑39 (MQ=255) gtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgc > 1:9400748‑M2/11‑51 (MQ=255) gtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgc > 1:7048144‑M2/11‑51 (MQ=255) ttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:9236124‑M2/51‑40 (MQ=255) ttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:8928296‑M2/51‑40 (MQ=255) tgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgcc < 1:8748365‑M2/42‑1 (MQ=255) tgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgcc < 1:2908925‑M2/42‑1 (MQ=255) cagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGt > 1:7605068‑M2/8‑51 (MQ=255) cagtacaTTGTCATAGGCCCACGAGGCGCCCGGTAATATAGAGGCCGCCGt > 1:7303525‑M2/8‑51 (MQ=255) aGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:7033936‑M2/51‑42 (MQ=255) aGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:10466351‑M2/51‑42 (MQ=255) agtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGtt > 1:1297717‑M2/7‑51 (MQ=255) gtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGttt < 1:8932808‑M2/46‑1 (MQ=255) ccTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:1968798‑M2/51‑44 (MQ=255) cTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:2515187‑M2/51‑45 (MQ=255) tCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:1620682‑M2/1‑6 (MQ=255) acaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCa < 1:191482‑M2/48‑1 (MQ=255) acaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCa < 1:5609739‑M2/48‑1 (MQ=255) cGTTGtgtactgaccccaaaaagttggacagttaa > 1:7353685‑M2/1‑5 (MQ=255) aTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTTAGc > 1:8438331‑M2/2‑51 (MQ=255) ttGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGcc > 1:9773834/1‑51 (MQ=255) tGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCg < 1:10343259/51‑1 (MQ=255) | AACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCG > REL606/1354377‑1354476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |