| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | 100% | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 76 (0.800) | 50/80 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1354425 = | 0 (0.000) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
| * | ? | REL606 | = 666130 | NA (NA) | 98 (1.060) | 54/78 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1354427 | 0 (0.000) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
Only 100 of 221 total aligned reads displayed.
TCAACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCC > REL606/1354375‑1354475 | tCAACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGt > 1:5363449/1‑51 (MQ=255) cAACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGtt > 1:2173165/1‑51 (MQ=255) aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTg < 1:1452841/51‑1 (MQ=255) aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTg > 1:10499600/1‑51 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTc > 1:1779611‑M2/47‑51 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTc < 1:532359‑M2/5‑1 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:3464636‑M2/46‑51 (MQ=255) tGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgt > 1:860659‑M2/1‑48 (MQ=255) gTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgta > 1:5011888‑M2/1‑47 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCAt > 1:3153340‑M2/45‑51 (MQ=255) ttCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtac < 1:5634222‑M2/51‑6 (MQ=255) ttCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtac < 1:10773037‑M2/51‑6 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATa < 1:6390739‑M2/8‑1 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAg < 1:370404‑M2/9‑1 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAg > 1:2060473‑M2/43‑51 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAgg < 1:2492327‑M2/10‑1 (MQ=255) cgcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactg > 1:7905674‑M2/1‑44 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc < 1:3054948‑M2/11‑1 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc > 1:5044745‑M2/41‑51 (MQ=255) gcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactga > 1:6547449‑M2/1‑43 (MQ=255) gcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactga < 1:7744838‑M2/51‑9 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGcc < 1:3573756‑M2/12‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGccc > 1:6611351‑M2/39‑51 (MQ=255) gcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgacc > 1:8197414‑M2/1‑41 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:5828507‑M2/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:8104010‑M2/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:8885101‑M2/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:6477059‑M2/14‑1 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCAc > 1:8549654‑M2/37‑51 (MQ=255) gATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgacccc < 1:10031605‑M2/51‑13 (MQ=255) gATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgacccc < 1:2856569‑M2/51‑13 (MQ=255) gATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgacccc < 1:5449467‑M2/51‑13 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACg > 1:965538‑M2/36‑51 (MQ=255) ttCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaa < 1:1144791‑M2/51‑16 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAgg > 1:9077511‑M2/33‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc < 1:1891893‑M2/20‑1 (MQ=255) cGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaa < 1:2305261‑M2/51‑18 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcg > 1:7779158‑M2/31‑51 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcg > 1:8372239‑M2/31‑51 (MQ=255) gCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaag < 1:5071475‑M2/51‑19 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcgc < 1:5608448‑M2/22‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcgc > 1:3280954‑M2/30‑51 (MQ=255) ccGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagt < 1:2364559‑M2/51‑20 (MQ=255) cGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagtt > 1:8844503‑M2/1‑31 (MQ=255) ggATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttg < 1:718367‑M2/51‑22 (MQ=255) gATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttgg < 1:417518‑M2/51‑23 (MQ=255) cgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCgg < 1:7436843‑M2/26‑1 (MQ=255) aTTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaa > 1:10671261‑M2/1‑28 (MQ=255) ttGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggac > 1:3999172‑M2/1‑27 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCgg > 1:3876710‑M2/25‑50 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGt < 1:1737640‑M2/27‑1 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGt > 1:5171413‑M2/25‑51 (MQ=255) gTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacag < 1:921603‑M2/51‑27 (MQ=255) gTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacag > 1:9561503‑M2/1‑25 (MQ=255) gTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacag < 1:6016952‑M2/51‑27 (MQ=255) ccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaa > 1:2969226‑M2/23‑51 (MQ=255) tATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagt < 1:3310550‑M2/51‑28 (MQ=255) caacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaaa < 1:9590799‑M2/30‑1 (MQ=255) caacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaaa > 1:7506553‑M2/22‑51 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:1099345‑M2/51‑29 (MQ=255) ttCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtta > 1:4774294‑M2/1‑22 (MQ=255) ttCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtta < 1:9481974‑M2/51‑30 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa > 1:6202025‑M2/1‑21 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:9627274‑M2/51‑31 (MQ=255) cAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaa < 1:6349056‑M2/51‑32 (MQ=255) cAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaa < 1:7100258‑M2/51‑32 (MQ=255) aaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATag < 1:5126857‑M2/34‑1 (MQ=255) gTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaaca > 1:4316757‑M2/1‑18 (MQ=255) tAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacac > 1:2591584‑M2/1‑17 (MQ=255) tgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgc < 1:4635656‑M2/38‑1 (MQ=255) aaTTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:321750‑M2/46‑31 (MQ=255) gggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgcc > 1:10218943‑M2/13‑51 (MQ=255) aTTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacga > 1:10753965‑M2/1‑15 (MQ=255) ttttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgag < 1:223872‑M2/51‑38 (MQ=255) ttttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgag < 1:2668498‑M2/51‑38 (MQ=255) gtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgc > 1:9400748‑M2/11‑51 (MQ=255) ttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:631553‑M2/51‑40 (MQ=255) ttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:9236124‑M2/51‑40 (MQ=255) ttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggc < 1:8928296‑M2/51‑40 (MQ=255) cagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGt > 1:7233454‑M2/8‑51 (MQ=255) cagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGt > 1:7605068‑M2/8‑51 (MQ=255) aGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:7033936‑M2/51‑42 (MQ=255) aGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:7038956‑M2/51‑42 (MQ=255) agtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGtt > 1:1297717‑M2/7‑51 (MQ=255) gtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGttt < 1:10465634‑M2/46‑1 (MQ=255) gtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGttt < 1:8932808‑M2/46‑1 (MQ=255) ccTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:6696782‑M2/51‑44 (MQ=255) ccTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:1968798‑M2/51‑44 (MQ=255) tacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTc > 1:6880532‑M2/5‑51 (MQ=255) tacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTc > 1:5984146‑M2/5‑51 (MQ=255) cTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:2515187‑M2/51‑45 (MQ=255) cTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 1:5445728‑M2/1‑7 (MQ=255) tCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:1620682‑M2/1‑6 (MQ=255) acaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCa > 1:10362799‑M2/4‑51 (MQ=255) acaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCa < 1:191482‑M2/48‑1 (MQ=255) cGTTGtgtactgaccccaaaaagttggacagttaa > 1:7353685‑M2/1‑5 (MQ=255) aTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTTAGc > 1:8438331‑M2/2‑51 (MQ=255) aTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGc < 1:8731266‑M2/50‑1 (MQ=255) aTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGc > 1:10887416‑M2/2‑51 (MQ=255) ttGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGcc > 1:9773834/1‑51 (MQ=255) | TCAACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCC > REL606/1354375‑1354475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |