Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 969,836 IS150 (+) +3 bp 100% coding (810‑812/2283 nt) pflB ← pyruvate formate lyase I

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 590471NA (NA)78 (0.820) 44/80 NT 98.6% noncoding (1977/1977 nt) IS150 repeat region
?REL606 969836 = 1 (0.010)coding (812/2283 nt) pflB pyruvate formate lyase I
* ? REL606 664688 =NA (NA)78 (0.870) 44/76 NT 98.6% noncoding (1/1443 nt) IS150 repeat region
?REL606 = 969838 1 (0.010)coding (810/2283 nt) pflB pyruvate formate lyase I

Only 100 of 202 total aligned reads displayed.

TACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTC  >  REL606/969788‑969888
                                                  |                                                  
tACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTc                                                    <  1:5410719/51‑1 (MQ=255)
tACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTc                                                    >  1:3062722/1‑51 (MQ=255)
 acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCt                                                   <  1:6125782‑M2/4‑1 (MQ=255)
 acacATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCt                                                   >  1:209142‑M2/1‑50 (MQ=255)
 acacATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCt                                                   >  1:8805065‑M2/1‑50 (MQ=255)
  cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTg                                                  <  1:3219307‑M2/5‑1 (MQ=255)
  cacaTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtg                                                  <  1:5789498‑M2/51‑3 (MQ=255)
  cacaTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCng                                                  >  1:3573130‑M2/1‑49 (MQ=255)
   ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTga                                                 >  1:7575428‑M2/46‑51 (MQ=255)
    tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTgag                                                <  1:10768804‑M2/7‑1 (MQ=255)
    tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTgag                                                <  1:8066680‑M2/7‑1 (MQ=255)
    caTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgta                                                <  1:8249550‑M2/51‑5 (MQ=255)
    caTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgta                                                >  1:2524657‑M2/1‑47 (MQ=255)
      tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGAc                                              >  1:2924882‑M2/43‑51 (MQ=255)
       atgcctcgtgtttaactgtccaactttttgggggcagtacaTTCTGAGACt                                             >  1:9502737‑M2/42‑51 (MQ=255)
        tgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACtt                                            >  1:3859465‑M2/41‑51 (MQ=255)
        tgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACtt                                            <  1:10264554‑M2/11‑1 (MQ=255)
        cAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgc                                            <  1:4123828‑M2/51‑9 (MQ=255)
         gcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTa                                           <  1:1635292‑M2/12‑1 (MQ=255)
         gcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTa                                           <  1:5197713‑M2/12‑1 (MQ=255)
           gaagGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacc                                         <  1:5831864‑M2/51‑12 (MQ=255)
           gaagGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCTGAGACTTAAc                                         >  1:6970910/1‑51 (MQ=255)
            tcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTAAca                                        <  1:245320‑M2/15‑1 (MQ=255)
            aagGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcaccc                                        <  1:10498228‑M2/51‑13 (MQ=255)
             agGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcaccca                                       >  1:2888898‑M2/1‑38 (MQ=255)
               tgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTAAcagca                                     >  1:5888621‑M2/34‑51 (MQ=255)
               gTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccatt                                     >  1:6174911‑M2/1‑36 (MQ=255)
                gtttaactgtccaactttttggggtcagtacaTTCCGAGACTTAAcagcag                                    >  1:5942643‑M2/33‑51 (MQ=255)
                 tttaactgtccaactttttggggtcagtacaTTCTGAGACTTAACagcagc                                   >  1:974206‑M2/32‑51 (MQ=255)
                   aGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgt                                 <  1:7108478‑M2/51‑20 (MQ=255)
                    aactgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAg                                <  1:554013‑M2/23‑1 (MQ=255)
                     gTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttg                               >  1:6801572‑M2/1‑30 (MQ=255)
                     gTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttg                               >  1:4784485‑M2/1‑30 (MQ=255)
                      tACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttgg                              >  1:4691025‑M2/1‑29 (MQ=255)
                      tACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttgg                              >  1:941240‑M2/1‑29 (MQ=255)
                      ctgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGt                              <  1:504350‑M2/25‑1 (MQ=255)
                       tgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTa                             >  1:9319220‑M2/26‑51 (MQ=255)
                       tgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTa                             <  1:379105‑M2/26‑1 (MQ=255)
                        gtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAg                            <  1:2188943‑M2/27‑1 (MQ=255)
                        cGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggac                            <  1:3493028‑M2/51‑25 (MQ=255)
                        cGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggac                            <  1:6359163‑M2/51‑25 (MQ=255)
                        cGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggac                            >  1:2766581‑M2/1‑27 (MQ=255)
                         tccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGc                           <  1:7437497‑M2/28‑1 (MQ=255)
                         gACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacg                           >  1:4453562‑M2/1‑26 (MQ=255)
                          aCCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacga                          <  1:7987113‑M2/51‑27 (MQ=255)
                           ccGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgat                         >  1:3345670‑M2/1‑24 (MQ=255)
                           caactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCg                         >  1:7009192‑M2/22‑51 (MQ=255)
                             actttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaa                       <  1:8097476‑M2/32‑1 (MQ=255)
                             actttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaa                       <  1:1466097‑M2/32‑1 (MQ=255)
                              aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa                      >  1:7876882‑M2/1‑21 (MQ=255)
                              aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa                      >  1:6572480‑M2/1‑21 (MQ=255)
                              aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa                      >  1:8391674‑M2/1‑21 (MQ=255)
                              aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa                      >  1:10306955‑M2/1‑21 (MQ=255)
                               tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt                     >  1:6006175‑M2/18‑51 (MQ=255)
                               tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt                     <  1:2824488‑M2/34‑1 (MQ=255)
                               tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt                     >  1:2008406‑M2/18‑51 (MQ=255)
                               tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt                     >  1:184304‑M2/18‑51 (MQ=255)
                               aGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaa                     >  1:1883435‑M2/1‑20 (MQ=255)
                                ggACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaat                    >  1:4603386‑M2/1‑19 (MQ=255)
                                 gACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatg                   <  1:119417‑M2/51‑34 (MQ=255)
                                  ttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagtaag                  <  1:6492062‑M2/37‑1 (MQ=255)
                                  aCATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatgg                  >  1:4161881‑M2/1‑17 (MQ=255)
                                   tggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagtaagt                 <  1:9661072‑M2/38‑1 (MQ=255)
                                    ggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTc                <  1:7245519‑M2/39‑1 (MQ=255)
                                    aTTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaa                >  1:9348‑M2/1‑15 (MQ=255)
                                    aTTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaa                >  1:10226637‑M2/1‑15 (MQ=255)
                                     ttGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaat               >  1:7671733‑M2/1‑14 (MQ=255)
                                     ttGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaat               >  1:5607810‑M2/1‑14 (MQ=255)
                                      tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata              <  1:4898464‑M2/51‑39 (MQ=255)
                                      tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata              <  1:3950065‑M2/51‑39 (MQ=255)
                                      tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata              >  1:8593308‑M2/1‑13 (MQ=255)
                                      tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata              >  1:3708245‑M2/1‑13 (MQ=255)
                                      ggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCa              <  1:1580587‑M2/41‑1 (MQ=255)
                                       gcagcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatag             >  1:8759396‑M2/1‑12 (MQ=255)
                                       gcagcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatag             >  1:3873217‑M2/1‑12 (MQ=255)
                                        tcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACt            >  1:10100723‑M2/9‑51 (MQ=255)
                                        cagcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagc            >  1:9588931‑M2/1‑11 (MQ=255)
                                         cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg           <  1:1344125‑M2/44‑1 (MQ=255)
                                         cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg           <  1:1496602‑M2/44‑1 (MQ=255)
                                         cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg           <  1:5703223‑M2/44‑1 (MQ=255)
                                         cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg           >  1:3407633‑M2/8‑51 (MQ=255)
                                         agcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcc           >  1:8964585‑M2/1‑10 (MQ=255)
                                          gcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcc           >  1:226431‑M2/1‑9 (MQ=255)
                                          agtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTgg          >  1:3435267‑M2/7‑51 (MQ=255)
                                          agtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTgg          >  1:5652824‑M2/7‑51 (MQ=255)
                                           gtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGa         <  1:1553454‑M2/46‑1 (MQ=255)
                                           gtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGa         <  1:5440135‑M2/46‑1 (MQ=255)
                                           gtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGa         >  1:3605034‑M2/6‑51 (MQ=255)
                                            aCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcccct        <  1:10162068‑M2/51‑45 (MQ=255)
                                            aCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcccct        <  1:1625116‑M2/51‑45 (MQ=255)
                                             acaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATa       <  1:3526738‑M2/48‑1 (MQ=255)
                                             acaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATa       <  1:4317768‑M2/48‑1 (MQ=255)
                                              caTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAg      <  1:6403977‑M2/49‑1 (MQ=255)
                                              cGTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaa      >  1:2367651‑M2/1‑5 (MQ=255)
                                               gTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat     >  1:7397578‑M2/1‑4 (MQ=255)
                                               aTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGc     <  1:9042610‑M2/50‑1 (MQ=255)
                                               aTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGc     >  1:6296831‑M2/2‑51 (MQ=255)
                                               aTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGc     <  1:2615348‑M2/50‑1 (MQ=255)
                                                  cTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTc  >  1:8155253/1‑51 (MQ=255)
                                                  cTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTc  >  1:6066080/1‑51 (MQ=255)
                                                  |                                                  
TACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTC  >  REL606/969788‑969888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.