Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 969,836 | IS150 (+) +3 bp | 100% | coding (810‑812/2283 nt) | pflB ← | pyruvate formate lyase I |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 590471 | NA (NA) | 78 (0.820) | 44/80 | NT | 98.6% | noncoding (1977/1977 nt) | IS150 | repeat region |
? | REL606 | 969836 = | 1 (0.010) | coding (812/2283 nt) | pflB | pyruvate formate lyase I | |||||
* | ? | REL606 | 664688 = | NA (NA) | 78 (0.870) | 44/76 | NT | 98.6% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | = 969838 | 1 (0.010) | coding (810/2283 nt) | pflB | pyruvate formate lyase I |
Only 100 of 202 total aligned reads displayed.
TACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTC > REL606/969788‑969888 | tACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTc < 1:5410719/51‑1 (MQ=255) tACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTc > 1:3062722/1‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCt < 1:6125782‑M2/4‑1 (MQ=255) acacATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCt > 1:209142‑M2/1‑50 (MQ=255) acacATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCt > 1:8805065‑M2/1‑50 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTg < 1:3219307‑M2/5‑1 (MQ=255) cacaTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtg < 1:5789498‑M2/51‑3 (MQ=255) cacaTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCng > 1:3573130‑M2/1‑49 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTga > 1:7575428‑M2/46‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTgag < 1:10768804‑M2/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTgag < 1:8066680‑M2/7‑1 (MQ=255) caTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgta < 1:8249550‑M2/51‑5 (MQ=255) caTCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgta > 1:2524657‑M2/1‑47 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGAc > 1:2924882‑M2/43‑51 (MQ=255) atgcctcgtgtttaactgtccaactttttgggggcagtacaTTCTGAGACt > 1:9502737‑M2/42‑51 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACtt > 1:3859465‑M2/41‑51 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACtt < 1:10264554‑M2/11‑1 (MQ=255) cAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgc < 1:4123828‑M2/51‑9 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTa < 1:1635292‑M2/12‑1 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTa < 1:5197713‑M2/12‑1 (MQ=255) gaagGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacc < 1:5831864‑M2/51‑12 (MQ=255) gaagGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCTGAGACTTAAc > 1:6970910/1‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTAAca < 1:245320‑M2/15‑1 (MQ=255) aagGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcaccc < 1:10498228‑M2/51‑13 (MQ=255) agGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcaccca > 1:2888898‑M2/1‑38 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTCTGAGACTTAAcagca > 1:5888621‑M2/34‑51 (MQ=255) gTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccatt > 1:6174911‑M2/1‑36 (MQ=255) gtttaactgtccaactttttggggtcagtacaTTCCGAGACTTAAcagcag > 1:5942643‑M2/33‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaTTCTGAGACTTAACagcagc > 1:974206‑M2/32‑51 (MQ=255) aGGTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgt < 1:7108478‑M2/51‑20 (MQ=255) aactgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAg < 1:554013‑M2/23‑1 (MQ=255) gTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttg > 1:6801572‑M2/1‑30 (MQ=255) gTACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttg > 1:4784485‑M2/1‑30 (MQ=255) tACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttgg > 1:4691025‑M2/1‑29 (MQ=255) tACGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttgg > 1:941240‑M2/1‑29 (MQ=255) ctgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGt < 1:504350‑M2/25‑1 (MQ=255) tgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTa > 1:9319220‑M2/26‑51 (MQ=255) tgtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTa < 1:379105‑M2/26‑1 (MQ=255) gtccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAg < 1:2188943‑M2/27‑1 (MQ=255) cGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggac < 1:3493028‑M2/51‑25 (MQ=255) cGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggac < 1:6359163‑M2/51‑25 (MQ=255) cGACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggac > 1:2766581‑M2/1‑27 (MQ=255) tccaactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGc < 1:7437497‑M2/28‑1 (MQ=255) gACCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacg > 1:4453562‑M2/1‑26 (MQ=255) aCCGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacga < 1:7987113‑M2/51‑27 (MQ=255) ccGAAGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgat > 1:3345670‑M2/1‑24 (MQ=255) caactttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCg > 1:7009192‑M2/22‑51 (MQ=255) actttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaa < 1:8097476‑M2/32‑1 (MQ=255) actttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaa < 1:1466097‑M2/32‑1 (MQ=255) aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa > 1:7876882‑M2/1‑21 (MQ=255) aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa > 1:6572480‑M2/1‑21 (MQ=255) aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa > 1:8391674‑M2/1‑21 (MQ=255) aaGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaa > 1:10306955‑M2/1‑21 (MQ=255) tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt > 1:6006175‑M2/18‑51 (MQ=255) tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt < 1:2824488‑M2/34‑1 (MQ=255) tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt > 1:2008406‑M2/18‑51 (MQ=255) tttttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagt > 1:184304‑M2/18‑51 (MQ=255) aGGACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaa > 1:1883435‑M2/1‑20 (MQ=255) ggACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaat > 1:4603386‑M2/1‑19 (MQ=255) gACATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatg < 1:119417‑M2/51‑34 (MQ=255) ttggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagtaag < 1:6492062‑M2/37‑1 (MQ=255) aCATTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatgg > 1:4161881‑M2/1‑17 (MQ=255) tggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGaagtaagt < 1:9661072‑M2/38‑1 (MQ=255) ggggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTc < 1:7245519‑M2/39‑1 (MQ=255) aTTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaa > 1:9348‑M2/1‑15 (MQ=255) aTTGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaa > 1:10226637‑M2/1‑15 (MQ=255) ttGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaat > 1:7671733‑M2/1‑14 (MQ=255) ttGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaat > 1:5607810‑M2/1‑14 (MQ=255) tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata < 1:4898464‑M2/51‑39 (MQ=255) tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata < 1:3950065‑M2/51‑39 (MQ=255) tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata > 1:8593308‑M2/1‑13 (MQ=255) tGCAGCACCGTTCtgtactgcacccattttgttggacgatgaaatggaata > 1:3708245‑M2/1‑13 (MQ=255) ggtcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCa < 1:1580587‑M2/41‑1 (MQ=255) gcagcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatag > 1:8759396‑M2/1‑12 (MQ=255) gcagcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatag > 1:3873217‑M2/1‑12 (MQ=255) tcagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACt > 1:10100723‑M2/9‑51 (MQ=255) cagcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagc > 1:9588931‑M2/1‑11 (MQ=255) cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg < 1:1344125‑M2/44‑1 (MQ=255) cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg < 1:1496602‑M2/44‑1 (MQ=255) cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg < 1:5703223‑M2/44‑1 (MQ=255) cagtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTg > 1:3407633‑M2/8‑51 (MQ=255) agcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:8964585‑M2/1‑10 (MQ=255) gcaCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:226431‑M2/1‑9 (MQ=255) agtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTgg > 1:3435267‑M2/7‑51 (MQ=255) agtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTgg > 1:5652824‑M2/7‑51 (MQ=255) gtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGa < 1:1553454‑M2/46‑1 (MQ=255) gtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGa < 1:5440135‑M2/46‑1 (MQ=255) gtacaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGa > 1:3605034‑M2/6‑51 (MQ=255) aCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:10162068‑M2/51‑45 (MQ=255) aCCGTTCtgtactgcacccattttgttggacgatgaaatggaatagcccct < 1:1625116‑M2/51‑45 (MQ=255) acaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATa < 1:3526738‑M2/48‑1 (MQ=255) acaTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATa < 1:4317768‑M2/48‑1 (MQ=255) caTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAg < 1:6403977‑M2/49‑1 (MQ=255) cGTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:2367651‑M2/1‑5 (MQ=255) gTTCtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:7397578‑M2/1‑4 (MQ=255) aTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGc < 1:9042610‑M2/50‑1 (MQ=255) aTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGc > 1:6296831‑M2/2‑51 (MQ=255) aTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGc < 1:2615348‑M2/50‑1 (MQ=255) cTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTc > 1:8155253/1‑51 (MQ=255) cTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTc > 1:6066080/1‑51 (MQ=255) | TACACATCCAAGAAGGTGGAGGTACGACCGAAGGACATTGCAGCACCGTTCTGAGACTTAACAGCAGCCAGGTAGCCGAAGTAAGTCCACTGGATAGCTTC > REL606/969788‑969888 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |