New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2655781 = | 0 (0.000) | 92 (1.020) | 51/76 | NT | 100% | coding (662/732 nt) | yfiH | hypothetical protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 136 total aligned reads displayed.
CCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACG > REL606/2655734‑2655831 | acctatatgcctcgtgtttaactgtccaactttttggggtcagtacatttt > 1:2183310‑M1/48‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacatttt > 1:6931311‑M1/48‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacatttt < 1:9354256‑M1/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacatttt > 1:6702090‑M1/48‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacatttt > 1:2913729‑M1/48‑51 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacatttt > 1:6881586‑M1/48‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc < 1:3341249‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc > 1:1091979‑M1/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc < 1:5225693‑M1/5‑1 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc > 1:3142788‑M1/47‑51 (MQ=255) cctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTc < 1:2255107‑M1/5‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaacttttggggtcagtacaTTTTc < 1:4157079‑M1/5‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTtca > 1:5066830‑M1/46‑50 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTtca < 1:3816521‑M1/6‑2 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTcc > 1:5509361‑M1/46‑51 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTcc > 1:3163261‑M1/46‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCg < 1:2186402‑M1/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCg > 1:5859922‑M1/45‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCg > 1:4281074‑M1/45‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCg < 1:5572598‑M1/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCg < 1:9335939‑M1/7‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCg < 1:2708660‑M1/7‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacatttt < 1:1062110‑M1/4‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGt < 1:8786129‑M1/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGt < 1:5618619‑M1/8‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGt > 1:8108390‑M1/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGt > 1:4294420‑M1/44‑51 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGt > 1:7853893‑M1/44‑51 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacattttcaggg < 1:4838121‑M1/9‑5 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGtat < 1:6866961‑M1/10‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGtat > 1:7482376‑M1/42‑51 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGtat < 1:3491983‑M1/10‑1 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTatat > 1:10279342‑M1/40‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTatat > 1:5245102‑M1/40‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTatat > 1:2327580‑M1/40‑51 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATg > 1:6564009‑M1/39‑51 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATg > 1:5636877‑M1/39‑51 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATg > 1:3974109‑M1/39‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGt > 1:6872894‑M1/38‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGt > 1:1785788‑M1/38‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTa < 1:10233784‑M1/15‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTAc < 1:739244‑M1/16‑1 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACa > 1:8874613‑M1/35‑51 (MQ=255) gtgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACa > 1:5454855‑M1/35‑51 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACaa < 1:2030090‑M1/18‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACaa > 1:3656654‑M1/34‑51 (MQ=255) tgtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACaa > 1:7939045‑M1/34‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc < 1:4759147‑M1/19‑1 (MQ=255) gtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc > 1:5535600‑M1/33‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAAc > 1:2619661‑M1/33‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACg > 1:3019078‑M1/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACg > 1:1161324‑M1/32‑51 (MQ=255) tttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACg < 1:545835‑M1/20‑1 (MQ=255) ttaactgtccagctttttggggtcagtacaTTTTCCGTATATGTAc > 1:1447254‑M1/31‑46 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTAc > 1:6710154‑M1/31‑46 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACgg > 1:6532286‑M1/31‑51 (MQ=255) aactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc < 1:621068‑M1/23‑1 (MQ=255) aactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc < 1:2296236‑M1/23‑1 (MQ=255) aactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc > 1:2127439‑M1/29‑51 (MQ=255) aactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc > 1:5921090‑M1/29‑51 (MQ=255) aactgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTc > 1:6147151‑M1/29‑51 (MQ=255) actgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcg > 1:7027605‑M1/28‑51 (MQ=255) actgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcg > 1:314166‑M1/28‑51 (MQ=255) ctgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgc < 1:10911691‑M1/25‑1 (MQ=255) tgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgcc > 1:9072108‑M1/26‑51 (MQ=255) tgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgcc < 1:2511882‑M1/26‑1 (MQ=255) tgtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgcc > 1:8015806‑M1/26‑51 (MQ=255) gtccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgccg < 1:10437103‑M1/27‑1 (MQ=255) tccaactttttggggtcagtacaTTTTCCGTATATGTACAACGGTcgccgc < 1:6231992‑M1/28‑1 (MQ=255) caactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGccgccg < 1:3085329‑M1/30‑1 (MQ=255) aactttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGa < 1:6329059‑M1/31‑1 (MQ=255) actttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaa < 1:4040006‑M1/32‑1 (MQ=255) actttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaa > 1:4306637‑M1/20‑51 (MQ=255) tttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaaaa > 1:3820510‑M1/18‑51 (MQ=255) tttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaaaa > 1:6143861‑M1/18‑51 (MQ=255) tttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaaaa > 1:3407444‑M1/18‑51 (MQ=255) tttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGaaaa < 1:5951857‑M1/34‑1 (MQ=255) ttttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAAt < 1:7001560‑M1/35‑1 (MQ=255) tttggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAAtt < 1:1491668‑M1/36‑1 (MQ=255) tggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTg < 1:6139095‑M1/38‑1 (MQ=255) tggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTg > 1:5307380‑M1/14‑51 (MQ=255) ggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTg < 1:4422144‑M1/38‑1 (MQ=255) ggggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGt > 1:7630262‑M1/13‑51 (MQ=255) gggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGtt > 1:10646304‑M1/12‑51 (MQ=255) gggtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGtt < 1:4723596‑M1/40‑1 (MQ=255) gtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCa > 1:3575085‑M1/10‑51 (MQ=255) gtcagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCa < 1:3014894‑M1/42‑1 (MQ=255) cagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAac < 1:5248187‑M1/44‑1 (MQ=255) cagtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAac > 1:9721390‑M1/8‑51 (MQ=255) agtacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAaca > 1:1261612‑M1/7‑51 (MQ=255) tacaTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACAcc > 1:843021‑M1/5‑51 (MQ=255) caTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCaa > 1:9460944‑M1/3‑51 (MQ=255) caTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCaa > 1:3402093‑M1/3‑51 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGa > 1:466236‑M1/2‑32 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc < 1:10730417‑M1/50‑1 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc > 1:6661425‑M1/2‑51 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc < 1:4720291‑M1/50‑1 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc > 1:4678317‑M1/2‑51 (MQ=255) aTTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAAc > 1:9985128‑M1/2‑51 (MQ=255) ttttCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACg > 1:2733785/1‑51 (MQ=255) | CCATACGCCCGGTGGTCTTGTCGCGACGATAAGAGAAGAAAGTCTCATTTTCCGTATATGTACAACGGTCGCCGCCGAAAATTTGTTCAACACCAACG > REL606/2655734‑2655831 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |