| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3894996 | NA (NA) | 111 (1.170) | 58/80 | NT | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4049580 = | 0 (0.000) | coding (324/1242 nt) | yihS | predicted glucosamine isomerase | |||||
Only 100 of 150 total aligned reads displayed.
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894949‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > REL606/4049580‑4049629 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:10042167/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:9692116/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:9086760/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:10445021/1‑51GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:8700671/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:7999790/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:7807276/1‑51GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:7707056/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:7186443/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT < 1:140833/51‑1GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:6804608/1‑51GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT > 1:9860142/1‑51 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGG < 1:5111707/51‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGG < 1:6595506/51‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGG < 1:2896005/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:2188635/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:5709405/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:10670782/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA < 1:4443521/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGA > 1:5310376/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAG < 1:3872172/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAG < 1:10047259/51‑1 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAG < 1:8838395/51‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGG < 1:1617655/51‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGG > 1:9375946/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGC > 1:4609051/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGC < 1:2327003/51‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGC > 1:231131/1‑51 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCA < 1:7828276/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCA < 1:10840701/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCA < 1:1633142/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCA > 1:433619/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA < 1:6358601/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA > 1:9286192/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA > 1:5192475/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCA < 1:7839630/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCAC > 1:9586672/1‑51 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACC > 1:412258/1‑51 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACC > 1:4378445/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCA < 1:9284744/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCAC < 1:8432464/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCAC < 1:3805186/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACG < 1:5926790/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACG < 1:3348425/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACG > 1:8542201/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC > 1:3012449/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC < 1:4205823/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC > 1:9085194/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGC > 1:5458094/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCC > 1:7129972/1‑51 TAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCC > 1:3523906/1‑51 TAACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCC < 1:4191215/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTC < 1:9802336/51‑1 CTGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCG > 1:3647742/1‑51 TGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCGCGCCCTCGT < 1:9431261/51‑1 TGTCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGT > 1:1388317/1‑51 TCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCA < 1:1733718/51‑1 TCCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCA < 1:7351029/51‑1 CCAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCAT > 1:5406299/1‑51 CAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATT < 1:1844236/51‑1 CAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATT > 1:9707572/1‑51 CAACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATT > 1:3974838/1‑51 ACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCA < 1:1170126/51‑1 ACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCA < 1:9656412/51‑1 ACTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCA > 1:4010440/1‑51 CTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCAC > 1:2137194/1‑51 CTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCAC < 1:3561792/51‑1 CTTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCAC > 1:7627722/1‑51 TTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACG > 1:1062406/1‑51 TTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACG < 1:7084798/51‑1 TTTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACG > 1:6892001/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:6984316/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:7214788/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:6981364/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:6166211/1‑51 TTTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGC > 1:7394543/1‑51 TTTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCA > 1:6345027/1‑51 TTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAG > 1:2389910/1‑51 TTGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAG < 1:6578364/51‑1 TGGGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGG > 1:6543861/1‑51 GGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCA < 1:8625335/51‑1 GGGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCA < 1:4963069/51‑1 GGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCAT < 1:5137123/51‑1 GGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCAT > 1:247745/1‑51 GGTCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCAT < 1:7340371/51‑1 TCAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATAC < 1:6929274/51‑1 CAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACC < 1:328657/51‑1 CAGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACC > 1:10431035/1‑51 AGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCA > 1:3510193/1‑51 AGTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCA < 1:8262662/51‑1 GTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAG > 1:4967034/1‑51 GTACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAG < 1:7067591/51‑1 TACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGC < 1:6086031/51‑1 ACATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCC < 1:6030640/51‑1 CATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCG > 1:2931343/1‑51 CATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCC > 1:6620335/1‑50 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > 1:6748605/1‑51 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC < 1:4183642/51‑1 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > 1:2589913/1‑51 ATTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC < 1:5865296/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3894949‑3894996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGGAGGCATCCACCACGCCCTCGTCATTCACGCAGGCATACCAGCCGC > REL606/4049580‑4049629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |