| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3651091 = | NA (NA) | 110 (1.160) | 55/80 | NT | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4047675 | 0 (0.000) | coding (874/927 nt) | yihR | predicted aldose‑1‑epimerase | |||||
Only 100 of 133 total aligned reads displayed.
ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3651137‑3651091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA < REL606/4047675‑4047626 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT > 1:2655954/1‑51ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT < 1:10447718/51‑1ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT < 1:2504675/51‑1ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAAT > 1:9637372/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATC < 1:5887359/51‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATC > 1:8287437/1‑51 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATC > 1:1159193/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCA > 1:7438357/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCA > 1:7900312/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCA > 1:2257957/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGA > 1:9211687/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGA > 1:184970/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGA < 1:5543367/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA < 1:3314399/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA < 1:4092879/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA > 1:7615749/1‑51 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA > 1:6915339/1‑51 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAA > 1:9393202/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAAC > 1:5055481/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAAC > 1:1340951/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAAC > 1:9827204/1‑51 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAAC > 1:621790/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACC < 1:6326803/51‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACC < 1:2948214/51‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACC < 1:7303650/51‑1 TTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCG > 1:413444/1‑51 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGC > 1:2310513/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACTGCA > 1:2753882/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCAC > 1:6280341/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCAC > 1:8656290/1‑51 CATTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGAAC < 1:8118669/51‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:9583040/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:4015650/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:6878884/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG < 1:4039446/51‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCG > 1:6283684/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGC > 1:9342442/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGC < 1:9409553/51‑1 TCATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCC > 1:2959314/1‑51 CATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCT > 1:7414863/1‑51 CATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCT > 1:4396906/1‑51 ATCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTG < 1:3089066/51‑1 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT < 1:5697691/51‑1 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT > 1:622009/1‑51 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT < 1:1072872/51‑1 TCGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGT > 1:10736730/1‑51 CGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTT > 1:2265415/1‑51 CGTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTT < 1:1335976/51‑1 GTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTT < 1:5299056/51‑1 GTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTT < 1:10765700/51‑1 GTCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCC > 1:1469673/1‑46 TCCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTT > 1:3356116/1‑51 CCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTT > 1:10774791/1‑51 CCAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTT < 1:1617259/51‑1 CAACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTT < 1:3000109/51‑1 ACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAA < 1:8824190/51‑1 ACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAA < 1:7437896/51‑1 ACAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAA < 1:9872975/51‑1 CAAAATGGGTGCAGTACAGAATCGGGAAAACCGCACCGCCTGTTTTTTAAT > 1:5571591/1‑51 CAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAAT > 1:2035672/1‑51 CAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAAT < 1:9052782/51‑1 CAAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAAT < 1:2795272/51‑1 AAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATA > 1:958718/1‑51 AAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATA > 1:4295117/1‑51 AAAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATA > 1:1333379/1‑51 AAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATAT < 1:7954178/51‑1 AAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATAT < 1:4896577/51‑1 AAATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATAT < 1:1832214/51‑1 AATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATT > 1:1667684/1‑51 AATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATT < 1:2963329/51‑1 ATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTT > 1:6582731/1‑51 ATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTT < 1:8947230/51‑1 ATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTT > 1:3060397/1‑51 ATGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTT > 1:9877670/1‑51 TGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTA > 1:10164018/1‑51 TGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTA < 1:6795023/51‑1 TGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTA < 1:7552775/51‑1 TGGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTA < 1:2507436/51‑1 GGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTAC > 1:1757655/1‑51 GGGTGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTAC < 1:2454374/51‑1 TGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGA > 1:10886094/1‑51 TGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGA < 1:6971492/51‑1 TGCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGA < 1:1977026/51‑1 GCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGAC < 1:10463332/51‑1 GCAGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGAC < 1:3506959/51‑1 CAGTACAGAATCAGGAAAACTGCACCGCCTGTTTTTTAATATTTACGGACA < 1:7619719/51‑1 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG > 1:4478603/1‑51 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG > 1:5026368/1‑51 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG > 1:3936267/1‑51 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG < 1:4458489/51‑1 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAG < 1:7940546/51‑1 AGTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATT < 1:5954874/42‑1 GTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGA < 1:8333489/51‑1 GTACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGA < 1:6624362/51‑1 TACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAG < 1:6177042/51‑1 TACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAG > 1:7387896/1‑51 TACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAG > 1:908885/1‑51 ACAGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGA < 1:7263487/51‑1 AGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA > 1:1598401/1‑51 AGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA > 1:10648768/1‑51 ATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3651137‑3651091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAA < REL606/4047675‑4047626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |