Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 3,537,178 +GTACTGACCCCAAAA :: IS150 (–) :: +CAA 100% coding (40/2199 nt) zntA → zinc, cobalt and lead efflux system

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 666133NA (NA)65 (0.990)
+TGGGGTCAGTAC
37/56 NT 100% pseudogene (355/387 nt) gltL ATP‑binding protein of glutamate/aspartate transport system; b0652_1
?REL606 = 3537178 0 (0.000)coding (40/2199 nt) zntA zinc, cobalt and lead efflux system
* ? REL606 3537179 =0 (0.000)105 (1.200)
+TTG
51/74 NT 100% coding (41/2199 nt) zntA zinc, cobalt and lead efflux system
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 145 total aligned reads displayed.

GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3537228‑3537179
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA  >  REL606/3651091‑3651138
                                                  |||                                                
GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAAT                                                    <  1:6151295/51‑1
 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT                                                   <  1:4156906/51‑1
 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT                                                   <  1:2540025/51‑1
 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT                                                   <  1:6528322/51‑1
 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT                                                   <  1:10490029/51‑1
  AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG                                                  <  1:10211454/51‑1
  AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG                                                  >  1:3119826/1‑51
  AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG                                                  <  1:6134932/51‑1
   ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT                                                 >  1:6809231/1‑51
   ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT                                                 <  1:8642075/51‑1
   ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT                                                 <  1:3929593/51‑1
   ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT                                                 >  1:9048217/1‑51
   ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT                                                 <  1:8600472/51‑1
    CAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTG                                                >  1:114127/1‑51
     AGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGT                                               <  1:5762515/51‑1
     AGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGT                                               <  1:7434556/51‑1
      GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA                                              <  1:10335164/51‑1
      GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA                                              >  1:4012898/1‑51
      GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA                                              >  1:8386278/1‑51
         GTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTG                                           >  1:6782202/1‑51
         GTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTG                                           >  1:4557107/1‑51
          TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC                                          <  1:5556377/51‑1
          TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC                                          <  1:1959689/51‑1
          TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC                                          <  1:7551646/51‑1
           TGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCA                                         >  1:5099978/1‑51
             GCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACC                                       <  1:10402265/51‑1
              CGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCC                                      <  1:2391662/51‑1
               GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA                                     >  1:26496/1‑51
               GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA                                     >  1:185807/1‑51
               GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA                                     <  1:8113922/51‑1
               GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA                                     <  1:9842043/51‑1
               GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA                                     <  1:3390405/51‑1
                TTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCAT                                    >  1:9914066/1‑51
                TTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCAT                                    >  1:7942908/1‑51
                  CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT                                  >  1:1477156/1‑51
                  CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT                                  <  1:10307522/51‑1
                  CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT                                  >  1:2696334/1‑51
                   TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT                                 <  1:9110809/51‑1
                   TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT                                 <  1:4616422/51‑1
                   TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT                                 <  1:8987026/51‑1
                   TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT                                 <  1:4897346/51‑1
                    GTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTG                                <  1:7589165/51‑1
                      ACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTT                              >  1:7977404/1‑51
                       CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG                             <  1:5742454/51‑1
                       CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG                             <  1:3026789/51‑1
                        CGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGG                            <  1:128862/51‑1
                          TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC                          <  1:2615746/51‑1
                          TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC                          <  1:6588922/51‑1
                           GGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACG                         <  1:1162814/51‑1
                           GGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACG                         <  1:5392971/51‑1
                            GTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA                        <  1:1169224/51‑1
                            GTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA                        >  1:9439704/1‑51
                            GTTAGCGGGTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA                        <  1:1499571/51‑1
                             TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT                       >  1:7274704/1‑51
                             TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT                       <  1:7045272/51‑1
                             TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT                       >  1:9288982/1‑51
                             TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT                       >  1:5928440/1‑51
                              TAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATG                      <  1:8586373/51‑1
                               AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA                     >  1:2207609/1‑51
                               AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA                     >  1:7821573/1‑51
                               AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA                     <  1:1358838/51‑1
                                GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA                    <  1:5362587/51‑1
                                GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA                    <  1:6334870/51‑1
                                GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA                    <  1:10263330/51‑1
                                 CGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAA                   <  1:2199350/51‑1
                                  GGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAAT                  <  1:5941260/51‑1
                                    TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG                >  1:8382718/1‑51
                                    TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG                <  1:2234398/51‑1
                                    TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG                <  1:9267617/51‑1
                                    TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG                >  1:8191603/1‑51
                                     TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA               >  1:4175017/1‑51
                                     TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA               >  1:8256636/1‑51
                                     TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA               <  1:3401903/51‑1
                                      TGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA              <  1:4243428/51‑1
                                       GAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT             >  1:4033393/1‑51
                                        AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA            >  1:5648552/1‑51
                                        AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA            <  1:186166/51‑1
                                         ACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG           <  1:7778876/51‑1
                                         ACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA               >  1:10899388/1‑47
                                          CGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC          >  1:1327011/1‑51
                                           GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC         >  1:4884367/1‑51
                                           GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC         <  1:2610878/51‑1
                                           GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC         >  1:2095238/1‑51
                                            CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC        <  1:88910/51‑1
                                            CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC        >  1:3937860/1‑51
                                            CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC        <  1:7335011/51‑1
                                            CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC        >  1:4530193/1‑51
                                             AGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC       >  1:4593727/1‑51
                                             AGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC       <  1:10494552/51‑1
                                              GCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC       <  1:5544150/50‑1
                                              GCAATTGTGTACTGCACCCATTTCGTTGGACGATGAAATGGAATAGCCCCT      <  1:9535858/51‑1
                                               CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA     <  1:5634710/51‑1
                                               CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA     <  1:8742401/51‑1
                                               CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA     <  1:9118896/51‑1
                                                AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA    >  1:7102325/1‑51
                                                AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA    <  1:3640362/51‑1
                                                AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT      <  1:8649694/49‑1
                                                 ATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT   >  1:8778825/1‑51
                                                 ATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT   >  1:3454309/1‑51
                                                  TTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA  >  1:3619141/1‑51
                                                  |||                                                
GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3537228‑3537179
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA  >  REL606/3651091‑3651138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.