Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | 100% | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 666133 | NA (NA) | 65 (0.990) +TGGGGTCAGTAC |
37/56 | NT | 100% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
? | REL606 | = 3537178 | 0 (0.000) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
* | ? | REL606 | 3537179 = | 0 (0.000) | 105 (1.200) +TTG |
51/74 | NT | 100% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
Only 100 of 145 total aligned reads displayed.
GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3537228‑3537179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > REL606/3651091‑3651138 ||| GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAAT < 1:6151295/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:4156906/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:2540025/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:6528322/51‑1 CAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATT < 1:10490029/51‑1 AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG < 1:10211454/51‑1 AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG > 1:3119826/1‑51 AACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTG < 1:6134932/51‑1 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT > 1:6809231/1‑51 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT < 1:8642075/51‑1 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT < 1:3929593/51‑1 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT > 1:9048217/1‑51 ACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGT < 1:8600472/51‑1 CAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTG > 1:114127/1‑51 AGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGT < 1:5762515/51‑1 AGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGT < 1:7434556/51‑1 GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA < 1:10335164/51‑1 GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA > 1:4012898/1‑51 GTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTA > 1:8386278/1‑51 GTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTG > 1:6782202/1‑51 GTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTG > 1:4557107/1‑51 TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC < 1:5556377/51‑1 TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC < 1:1959689/51‑1 TTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGC < 1:7551646/51‑1 TGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCA > 1:5099978/1‑51 GCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACC < 1:10402265/51‑1 CGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCC < 1:2391662/51‑1 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA > 1:26496/1‑51 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA > 1:185807/1‑51 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA < 1:8113922/51‑1 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA < 1:9842043/51‑1 GTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCA < 1:3390405/51‑1 TTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCAT > 1:9914066/1‑51 TTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCAT > 1:7942908/1‑51 CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT > 1:1477156/1‑51 CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT < 1:10307522/51‑1 CTGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTT > 1:2696334/1‑51 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:9110809/51‑1 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:4616422/51‑1 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:8987026/51‑1 TGTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTT < 1:4897346/51‑1 GTACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTG < 1:7589165/51‑1 ACCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTT > 1:7977404/1‑51 CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG < 1:5742454/51‑1 CCGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTG < 1:3026789/51‑1 CGTGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGG < 1:128862/51‑1 TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC < 1:2615746/51‑1 TGGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGAC < 1:6588922/51‑1 GGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACG < 1:1162814/51‑1 GGTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACG < 1:5392971/51‑1 GTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA < 1:1169224/51‑1 GTTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA > 1:9439704/1‑51 GTTAGCGGGTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGA < 1:1499571/51‑1 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT > 1:7274704/1‑51 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT < 1:7045272/51‑1 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT > 1:9288982/1‑51 TTAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGAT > 1:5928440/1‑51 TAGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATG < 1:8586373/51‑1 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA > 1:2207609/1‑51 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA > 1:7821573/1‑51 AGCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGA < 1:1358838/51‑1 GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:5362587/51‑1 GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:6334870/51‑1 GCGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:10263330/51‑1 CGGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:2199350/51‑1 GGTTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:5941260/51‑1 TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:8382718/1‑51 TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:2234398/51‑1 TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:9267617/51‑1 TTTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:8191603/1‑51 TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:4175017/1‑51 TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:8256636/1‑51 TTGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:3401903/51‑1 TGAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:4243428/51‑1 GAACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:4033393/1‑51 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA > 1:5648552/1‑51 AACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:186166/51‑1 ACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:7778876/51‑1 ACGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:10899388/1‑47 CGCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:1327011/1‑51 GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:4884367/1‑51 GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC < 1:2610878/51‑1 GCAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:2095238/1‑51 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:88910/51‑1 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:3937860/1‑51 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:7335011/51‑1 CAGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:4530193/1‑51 AGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC > 1:4593727/1‑51 AGCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:10494552/51‑1 GCAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:5544150/50‑1 GCAATTGTGTACTGCACCCATTTCGTTGGACGATGAAATGGAATAGCCCCT < 1:9535858/51‑1 CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:5634710/51‑1 CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:8742401/51‑1 CAATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:9118896/51‑1 AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:7102325/1‑51 AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:3640362/51‑1 AATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT < 1:8649694/49‑1 ATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:8778825/1‑51 ATTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:3454309/1‑51 TTGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:3619141/1‑51 ||| GCAACAGTCGTTGGCGTTCTGTACCGTGGTTAGCGGTTTGAACGCAGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3537228‑3537179 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > REL606/3651091‑3651138 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |