New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2655781 =0 (0.000)92 (1.020) 51/76 NT 100% coding (662/732 nt) yfiH hypothetical protein
?REL606 2774435 = NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 135 total aligned reads displayed.

GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2655830‑2655781
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  REL606/2774435‑2774481
                                                                                                 
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                >  1:9985128/1‑51
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                >  1:6908786/1‑51
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                >  1:6661425/1‑51
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                <  1:4720291/51‑1
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                >  1:4678317/1‑51
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT                                                <  1:10730417/51‑1
 TTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATG                                               >  1:3250433/1‑51
 TTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATG                                               >  1:9460944/1‑51
  TGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGT                                              <  1:6190381/51‑1
   GGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTA                                             >  1:843021/1‑51
     TGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACT                                           >  1:1261612/1‑51
      GTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTG                                          >  1:9721390/1‑51
       TTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGA                                         <  1:5201005/51‑1
        TGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGAC                                        <  1:3014894/51‑1
          AACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCC                                      >  1:10646304/1‑51
            CAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCA                                    >  1:5307380/1‑51
            CAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCA                                    <  1:6139095/51‑1
            CAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCC                                     <  1:4422144/50‑1
              AATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAA                                  <  1:1491668/51‑1
               ATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAA                                 <  1:7001560/51‑1
               ATTTTCGGCGGCGACCATTGTACATATACGGAAAATGTACTGACCCCAAAA                                 >  1:394673/1‑51
                TTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA                                >  1:6143861/1‑51
                TTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA                                >  1:3407444/1‑51
                TTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA                                >  1:5478089/1‑51
                 TTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA                                <  1:3106340/50‑1
                  TTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGT                              >  1:4306637/1‑51
                  TTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGT                              >  1:5586993/1‑51
                  TTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGT                              >  1:7794224/1‑51
                    CGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTG                            <  1:3085329/51‑1
                      GCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGA                          <  1:6231992/51‑1
                       CGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGAC                         <  1:10437103/51‑1
                        GGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA                        <  1:2511882/51‑1
                        GGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA                        >  1:8015806/1‑51
                        GGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA                        >  1:9072108/1‑51
                         GCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAG                       <  1:10911691/51‑1
                          CGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGT                      >  1:314166/1‑51
                           GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT                     <  1:621068/51‑1
                           GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT                     >  1:2234723/1‑51
                           GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT                     <  1:2296236/51‑1
                           GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT                     >  1:5921090/1‑51
                            ACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTA                    <  1:6418554/51‑1
                             CCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAA                   >  1:6532286/1‑51
                              CGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAA                  >  1:1161324/1‑51
                              CGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAA                  >  1:7372032/1‑51
                               GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC                 <  1:4371742/51‑1
                               GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC                 >  1:2619661/1‑51
                               GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC                 >  1:569439/1‑51
                               GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC                 <  1:4759147/51‑1
                                TTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA                >  1:3656654/1‑51
                                TTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA                >  1:7939045/1‑51
                                TTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA                <  1:2030090/51‑1
                                 TGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC               >  1:8874613/1‑51
                                 TGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC               >  1:5454855/1‑51
                                  GTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACG              <  1:739244/51‑1
                                  GTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAA                   >  1:6710154/1‑46
                                  GTACATATACGGAAAATGTACTGACCCCAAAAAGCTGGACAGTTAA                   >  1:1447254/1‑46
                                   TACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA             <  1:10233784/51‑1
                                   TACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA             >  1:4716796/1‑51
                                    ACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG            >  1:6872894/1‑51
                                    ACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG            >  1:1785788/1‑51
                                     CATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG           >  1:3974109/1‑51
                                     CATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG           >  1:6564009/1‑51
                                      ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC          >  1:5245102/1‑51
                                      ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC          >  1:2327580/1‑51
                                      ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC          >  1:10279342/1‑51
                                        gccctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT        >  1:2927540/6‑51
                                        ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT        <  1:5283845/51‑1
                                        ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT        <  1:3491983/51‑1
                                        ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT        >  1:7482376/1‑51
                                        ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT        <  1:6866961/51‑1
                                         ccctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA       <  1:4838121/47‑1
                                          cctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT      <  1:6069735/48‑1
                                          ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT      >  1:7853893/1‑51
                                          ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT      <  1:5618619/51‑1
                                          ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT      >  1:8108390/1‑51
                                          ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT      <  1:8786129/51‑1
                                           ctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     <  1:4174556/49‑1
                                           CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     >  1:4281074/1‑51
                                           CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     <  1:2708660/51‑1
                                           CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     <  1:9335939/51‑1
                                           CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     <  1:2186402/51‑1
                                           CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     <  1:5572598/51‑1
                                           CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA     >  1:5859922/1‑51
                                            tGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG    <  1:3816521/50‑1
                                            GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG    >  1:3163261/1‑51
                                            GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG    >  1:5509361/1‑51
                                            GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG    <  1:3424424/51‑1
                                             GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG   <  1:5225693/51‑1
                                             GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG   >  1:1091979/1‑51
                                             GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG   <  1:3341249/51‑1
                                             GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG   <  1:4742474/51‑1
                                             GAAAATGTACTGACCCCAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  <  1:4157079/51‑1
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  1:2076368/1‑51
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  1:6931311/1‑51
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  1:2183310/1‑51
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  1:2913729/1‑51
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  <  1:9354256/51‑1
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  1:6702090/1‑51
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  1:3675127/1‑51
                                              AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT      <  1:1062110/47‑1
                                                                                                 
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2655830‑2655781
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT  >  REL606/2774435‑2774481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.