New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2655781 = | 0 (0.000) | 92 (1.020) | 51/76 | NT | 100% | coding (662/732 nt) | yfiH | hypothetical protein |
? | REL606 | 2774435 = | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region |
Only 100 of 135 total aligned reads displayed.
GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2655830‑2655781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > REL606/2774435‑2774481 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT > 1:9985128/1‑51 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT > 1:6908786/1‑51 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT > 1:6661425/1‑51 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT < 1:4720291/51‑1 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT > 1:4678317/1‑51 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAT < 1:10730417/51‑1 TTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATG > 1:3250433/1‑51 TTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATG > 1:9460944/1‑51 TGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGT < 1:6190381/51‑1 GGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTA > 1:843021/1‑51 TGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACT > 1:1261612/1‑51 GTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTG > 1:9721390/1‑51 TTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGA < 1:5201005/51‑1 TGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGAC < 1:3014894/51‑1 AACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCC > 1:10646304/1‑51 CAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCA > 1:5307380/1‑51 CAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCA < 1:6139095/51‑1 CAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCC < 1:4422144/50‑1 AATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAA < 1:1491668/51‑1 ATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAA < 1:7001560/51‑1 ATTTTCGGCGGCGACCATTGTACATATACGGAAAATGTACTGACCCCAAAA > 1:394673/1‑51 TTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA > 1:6143861/1‑51 TTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA > 1:3407444/1‑51 TTTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA > 1:5478089/1‑51 TTTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAA < 1:3106340/50‑1 TTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGT > 1:4306637/1‑51 TTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGT > 1:5586993/1‑51 TTCGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGT > 1:7794224/1‑51 CGGCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTG < 1:3085329/51‑1 GCGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGA < 1:6231992/51‑1 CGGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGAC < 1:10437103/51‑1 GGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA < 1:2511882/51‑1 GGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA > 1:8015806/1‑51 GGCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACA > 1:9072108/1‑51 GCGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAG < 1:10911691/51‑1 CGACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGT > 1:314166/1‑51 GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT < 1:621068/51‑1 GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT > 1:2234723/1‑51 GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT < 1:2296236/51‑1 GACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTT > 1:5921090/1‑51 ACCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTA < 1:6418554/51‑1 CCGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:6532286/1‑51 CGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAA > 1:1161324/1‑51 CGTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAA > 1:7372032/1‑51 GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:4371742/51‑1 GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:2619661/1‑51 GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC > 1:569439/1‑51 GTTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAAC < 1:4759147/51‑1 TTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:3656654/1‑51 TTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:7939045/1‑51 TTGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:2030090/51‑1 TGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC > 1:8874613/1‑51 TGTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACAC > 1:5454855/1‑51 GTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 1:739244/51‑1 GTACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAA > 1:6710154/1‑46 GTACATATACGGAAAATGTACTGACCCCAAAAAGCTGGACAGTTAA > 1:1447254/1‑46 TACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA < 1:10233784/51‑1 TACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA > 1:4716796/1‑51 ACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG > 1:6872894/1‑51 ACATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG > 1:1785788/1‑51 CATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:3974109/1‑51 CATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 1:6564009/1‑51 ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:5245102/1‑51 ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:2327580/1‑51 ATATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGC > 1:10279342/1‑51 gccctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 1:2927540/6‑51 ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 1:5283845/51‑1 ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 1:3491983/51‑1 ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT > 1:7482376/1‑51 ATACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 1:6866961/51‑1 ccctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA < 1:4838121/47‑1 cctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:6069735/48‑1 ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT > 1:7853893/1‑51 ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:5618619/51‑1 ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT > 1:8108390/1‑51 ACGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:8786129/51‑1 ctGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:4174556/49‑1 CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA > 1:4281074/1‑51 CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:2708660/51‑1 CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:9335939/51‑1 CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:2186402/51‑1 CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA < 1:5572598/51‑1 CGGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATA > 1:5859922/1‑51 tGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:3816521/50‑1 GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:3163261/1‑51 GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG > 1:5509361/1‑51 GGAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 1:3424424/51‑1 GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:5225693/51‑1 GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG > 1:1091979/1‑51 GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:3341249/51‑1 GAAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGG < 1:4742474/51‑1 GAAAATGTACTGACCCC‑AAAAGTTGGACAGTTAAACACGAGGCATATAGGT < 1:4157079/51‑1 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:2076368/1‑51 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:6931311/1‑51 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:2183310/1‑51 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:2913729/1‑51 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT < 1:9354256/51‑1 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:6702090/1‑51 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:3675127/1‑51 AAAATGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 1:1062110/47‑1 GTTGGTGTTGAACAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAAtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2655830‑2655781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > REL606/2774435‑2774481 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |