New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 26557041 (0.010)83 (0.900) 45/78 NT 98.8% intergenic (‑123/+7) clpB/yfiH protein disaggregation chaperone/hypothetical protein
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 106 total aligned reads displayed.

GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2655655‑2655704
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  >  REL606/3651091‑3651134
                                                                                              
GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT                                             <  1:5038919/51‑1
GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT                                             <  1:6618248/51‑1
GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT                                             <  1:6090658/51‑1
GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT                                             >  1:46669/1‑51
GACCAGATTAATGTGAAAAAAAAATCACGCGTACCGGATCGTCTTGATTCT                                             <  1:1607992/51‑1
 ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTG                                            >  1:9608529/1‑51
 ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTG                                            <  1:4065448/51‑1
 ACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCT                                             <  1:5685549/50‑1
  CCAGATTAATGTGAAAAGAAAATCACGCGTGCCGGATCGTCTTGATTCTGT                                           <  1:9329255/51‑1
  CCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGT                                           >  1:7861440/1‑51
  CCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGT                                           >  1:4849916/1‑51
   CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTA                                          <  1:7854105/51‑1
   CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTA                                          >  1:5442112/1‑51
   CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTA                                          <  1:10383088/51‑1
   CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTA                                          >  1:2709074/1‑51
   CAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGT                                           >  1:8489530/1‑50
    AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC                                         >  1:1001852/1‑51
    AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC                                         <  1:3296590/51‑1
    AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC                                         <  1:7686057/51‑1
    AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC                                         >  1:10159788/1‑51
    AGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTAC                                         >  1:8765168/1‑51
     GATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACT                                        <  1:4350746/51‑1
     GATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACT                                        <  1:1969621/51‑1
      ATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTG                                       <  1:6436277/51‑1
       TTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGC                                      <  1:8240009/51‑1
         AATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCAC                                    >  1:5120825/1‑51
          ATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACC                                   >  1:7360029/1‑51
          ATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACC                                   >  1:5882577/1‑51
           TGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCC                                  >  1:2938527/1‑51
            GTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCC                                  >  1:10840311/1‑50
             TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT                                <  1:2679354/51‑1
             TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT                                <  1:1037150/51‑1
             TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT                                <  1:6659143/51‑1
             TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT                                >  1:6653621/1‑51
             TGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCAT                                >  1:5562310/1‑51
              GAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATT                               <  1:2677444/51‑1
               AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTT                              >  1:8251362/1‑51
               AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTT                              >  1:10543886/1‑51
               AAAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTT                              >  1:4370214/1‑51
                AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT                             <  1:4592454/51‑1
                AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT                             >  1:5641033/1‑51
                AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT                             >  1:2574079/1‑51
                AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT                             <  1:9136260/51‑1
                AAAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTT                             <  1:4917069/51‑1
                 AAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTG                            <  1:9592226/51‑1
                 AAGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTG                            >  1:3501670/1‑51
                  AGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGT                           >  1:7225746/1‑51
                  AGAAAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGT                           >  1:887331/1‑51
                     AAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGG                        >  1:6308335/1‑51
                     AAATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGG                        >  1:10696134/1‑51
                      AATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGA                       >  1:8119445/1‑51
                       ATCACGCGTACCGGATCGTCTTGGTTCTGTTCTGCACCCATTTT                             >  1:2128553/1‑44
                       ATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC                      <  1:2691389/51‑1
                       ATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC                      <  1:7333641/51‑1
                       ATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC                      <  1:7378235/51‑1
                       ATCACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC                      <  1:5662257/51‑1
                       ATCACGCGTACCGGATCGTCTTGATTCTGTACTACACCCATTTTGTTGGAC                      <  1:3509908/51‑1
                         CACGCGTACCGGATCGTCTTGATTCTGTACTGCCCCCATTTTGTTGG                        >  1:972110/1‑47
                         CACGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGA                    <  1:9750834/51‑1
                           CGCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGAC                      <  1:1064968/47‑1
                            GCGTACCGGATCGTTTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA                 >  1:306565/1‑51
                            GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA                 >  1:7013163/1‑51
                            GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA                 <  1:4893814/51‑1
                            GCGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGA                 <  1:1128656/51‑1
                             CGTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAA                <  1:2455775/51‑1
                              GTACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAA               >  1:7988675/1‑51
                               TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT              <  1:5274268/51‑1
                               TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT              >  1:2788494/1‑51
                               TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT              <  1:8521691/51‑1
                               TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT              >  1:3075353/1‑51
                               TACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAAT              <  1:7726658/51‑1
                                ACCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATG             <  1:7338890/51‑1
                                 CCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGG            >  1:3853599/1‑51
                                 CCGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGG            >  1:4070984/1‑51
                                  CGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA           >  1:1197017/1‑51
                                  CGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA           <  1:1568064/51‑1
                                  CGGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA           >  1:1793552/1‑51
                                   GGATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA          >  1:9151776/1‑51
                                    GATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT         <  1:6023763/51‑1
                                     ATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA        <  1:938369/51‑1
                                     ATCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA        <  1:10196262/51‑1
                                      TCGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA        >  1:8247669/1‑50
                                       CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC      <  1:1701430/51‑1
                                       CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC      <  1:990032/51‑1
                                       CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC      >  1:2388584/1‑51
                                       CGTCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC      >  1:4891942/1‑51
                                         TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC    <  1:10434628/51‑1
                                         TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC    <  1:759298/51‑1
                                         TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC    >  1:487435/1‑51
                                         TCTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC    >  1:90016/1‑51
                                          CTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC   >  1:9111387/1‑51
                                          CTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC   <  1:5131838/51‑1
                                          CTTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC   <  1:4050935/51‑1
                                          CTTGATTCTGTACTGCACCCATTTTGTTGGACGACGAAATGGAATAGCCCC   >  1:6143108/1‑51
                                           TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  <  1:4846876/51‑1
                                           TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  >  1:4741606/1‑51
                                           TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  <  1:10894621/51‑1
                                           TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  <  1:46611/51‑1
                                           TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  <  1:7997335/51‑1
                                           TTGATTCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  >  1:8797854/1‑51
                                                                                              
GACCAGATTAATGTGAAAAGAAAATCACGCGTACCGGATCGTCTTGATTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2655655‑2655704
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT  >  REL606/3651091‑3651134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.