Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | REL606 | 1,974,040 | Δ8,273 bp | 100% | IS1‑mediated | [yedU]–[yeeI] | [yedU], yedV, yedW, yedX, yedY, yedZ, yodA, yodB, serU, [yeeI] |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 1973302–1974039 | 1982312 | 8274–9011 | 53 [50] | [1] 107 | insA‑13–[yeeI] | insA‑13,insB‑13,yedU,yedV,yedW,yedX,yedY,yedZ,yodA,yodB,serU,[yeeI] |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1974039 | NA (NA) | 80 (0.840) | 50/80 | NT | 100% | noncoding (768/768 nt) | IS1 | repeat region |
? | REL606 | 1982313 = | 0 (0.000) | coding (664/798 nt) | yeeI | hypothetical protein |
Only 100 of 105 total aligned reads displayed.
CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1973991‑1974039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTT > REL606/1982313‑1982362 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAG < 1:6196500/51‑1 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGC > 1:182212/1‑51 GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGC < 1:1188058/51‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCG < 1:5028880/51‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCG > 1:233420/1‑51 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCG < 1:7487782/51‑1 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCG > 1:7719100/1‑51 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCG < 1:9635782/51‑1 GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGC > 1:9631739/1‑51 GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGC > 1:2751678/1‑51 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCC > 1:3329234/1‑51 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCC > 1:1008426/1‑51 ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCC < 1:1515630/51‑1 ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCC > 1:2804356/1‑51 ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCC > 1:4682073/1‑51 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCC > 1:9140425/1‑51 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCA > 1:2798851/1‑51 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCA < 1:10724868/51‑1 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAG < 1:1452184/51‑1 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGA > 1:6217084/1‑51 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGA > 1:808947/1‑51 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGA > 1:222290/1‑51 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAA < 1:5723445/51‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAA > 1:332875/1‑51 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAA < 1:3245647/51‑1 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAA > 1:10799224/1‑51 CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAA < 1:5767743/51‑1 TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAAC > 1:3202435/1‑51 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACT > 1:5903996/1‑51 AACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTT > 1:4822861/1‑51 ACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTT < 1:9613597/51‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTT < 1:9383069/51‑1 ACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTT > 1:2374903/1‑51 ACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTT > 1:4748143/1‑51 CATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTT < 1:10324971/51‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTT < 1:1147173/51‑1 CATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTT > 1:6019114/1‑51 CATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTT < 1:2172790/51‑1 ATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTT < 1:10011911/51‑1 ATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTT > 1:843407/1‑51 ATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTT < 1:1250196/51‑1 ATAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTT > 1:83351/1‑51 TAAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTG < 1:8881256/51‑1 AAAACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGC > 1:4068990/1‑51 AACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTC > 1:8189839/1‑51 ACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCC > 1:8166622/1‑51 ACACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCC > 1:9538703/1‑51 CACTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCT > 1:7586879/1‑51 CTATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCG > 1:1882364/1‑51 TNTCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGT > 1:4817775/1‑51 TATCAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGT > 1:3149665/1‑51 CAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTC > 1:5771546/1‑51 CAATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTC > 1:2423343/1‑51 AATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCC > 1:3963911/1‑51 AATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCC > 1:6566975/1‑51 ATAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCC > 1:6148846/1‑51 TAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCT > 1:5946799/1‑51 TAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCT > 1:1116612/1‑51 TAAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCT > 1:10313765/1‑51 AAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTT < 1:9630167/51‑1 AAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTT < 1:4651380/51‑1 AAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTT > 1:3389779/1‑51 AAGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTT < 1:58994/51‑1 AGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTC < 1:8211499/51‑1 AGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTC > 1:6222643/1‑51 AGTTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTC > 1:2365318/1‑51 TTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCAT < 1:9068711/51‑1 TTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCAT > 1:6388930/1‑51 TTGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCAT > 1:5848261/1‑51 TGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATT < 1:2822013/51‑1 TGGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATT > 1:5214777/1‑51 GGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTG > 1:7454965/1‑51 GGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTG > 1:6179273/1‑51 GGAGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTG < 1:746082/51‑1 AGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTG > 1:3433585/1‑51 AGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTG < 1:8461355/51‑1 AGTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTG > 1:6781420/1‑51 GTCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGG > 1:7868897/1‑51 TCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGC > 1:719945/1‑51 TCATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGC < 1:6895830/51‑1 CATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCA > 1:5824365/1‑51 CATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCA > 1:3440301/1‑51 ATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAA < 1:9775617/51‑1 ATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAA < 1:1680598/51‑1 ATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAA > 1:9173008/1‑51 ATTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAA > 1:1924762/1‑51 TTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAC < 1:5024645/51‑1 TTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAC < 1:9725976/51‑1 TTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAC > 1:3736944/1‑51 TTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAC < 1:365447/51‑1 TTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAC < 1:10503869/51‑1 TTACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAAC > 1:7117172/1‑51 TACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACG > 1:10187262/1‑51 TACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACG > 1:7500417/1‑51 TACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACG > 1:3819920/1‑51 TACCAGCGCACCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACG > 1:1011860/1‑51 ACCAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGT > 1:10692928/1‑51 CAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTT < 1:4709880/51‑1 CAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTT < 1:5733089/51‑1 CAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTT < 1:6097765/51‑1 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1973991‑1974039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTT > REL606/1982313‑1982362 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |