| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | REL606 | 3,537,178 | +GTACTGACCCCAAAA :: IS150 (–) :: +CAA | 100% | coding (40/2199 nt) | zntA → | zinc, cobalt and lead efflux system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666133 | NA (NA) | 65 (0.990) +TGGGGTCAGTAC |
37/56 | NT | 100% | pseudogene (355/387 nt) | gltL | ATP‑binding protein of glutamate/aspartate transport system; b0652_1 |
| ? | REL606 | = 3537178 | 0 (0.000) | coding (40/2199 nt) | zntA | zinc, cobalt and lead efflux system | |||||
| * | ? | REL606 | 3537179 = | 0 (0.000) | 105 (1.200) +TTG |
51/74 | NT | 100% | coding (41/2199 nt) | zntA | zinc, cobalt and lead efflux system |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 162 total aligned reads displayed.
CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666085‑666133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC < REL606/3537178‑3537129 |||||||||||| CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTG < 1:8585093/51‑1CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTG > 1:8963167/1‑51 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGG > 1:7892272/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGG > 1:2439048/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG > 1:1687022/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGG > 1:701442/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGT > 1:10798004/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGT > 1:6546857/1‑51 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGT < 1:10646289/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTC < 1:5207480/51‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCA > 1:6842803/1‑51 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAG < 1:7810865/51‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAG < 1:5186354/51‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAG < 1:8165619/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGT > 1:5828709/1‑51 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGT < 1:403400/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTA > 1:6162962/1‑51 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTAC < 1:2951659/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTAC > 1:7270398/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT < 1:5454726/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT < 1:2795535/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT < 1:9815652/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACAT > 1:8863657/1‑51 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT < 1:5266731/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT > 1:6576803/1‑51 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT < 1:1107491/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATT < 1:9746337/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTG < 1:4655337/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGA > 1:9671114/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGA > 1:7242654/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG < 1:6419019/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG > 1:88725/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAG < 1:5328825/51‑1 TAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGG > 1:4765598/1‑51 TAACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGG > 1:8208190/1‑51 TAACTGTCCAAC‑TTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG < 1:2877571/51‑1 AACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG < 1:3623579/51‑1 AACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGG > 1:9436214/1‑51 ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG < 1:10614346/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG < 1:6184104/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGG < 1:3033453/51‑1 CTGTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGC < 1:239003/51‑1 GTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT < 1:9237178/51‑1 GTCCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT < 1:10244887/51‑1 CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTC > 1:1900516/1‑51 CCAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTT > 1:4523175/1‑49 CAACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCT < 1:3947045/51‑1 AACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTT < 1:1667783/51‑1 AACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCT < 1:10275689/50‑1 ACTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTG < 1:8426386/51‑1 CTTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGC > 1:5588614/1‑51 TTTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCC > 1:4131671/1‑51 TTTTGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCG > 1:3442041/1‑51 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGA > 1:5999223/1‑51 TGGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCG > 1:1380646/1‑48 GGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGAT > 1:8568637/1‑51 GGGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGAT > 1:5904699/1‑51 GGGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATT > 1:9868843/1‑51 GGTCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTG < 1:1831518/51‑1 TCAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTC < 1:10261629/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA < 1:10048064/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA < 1:133699/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA < 1:2133761/51‑1 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCA > 1:6930926/1‑51 CAGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTC > 1:7152659/1‑50 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG > 1:869308/1‑51 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG > 1:3646139/1‑51 AGTACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAG > 1:4592469/1‑51 TACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGA < 1:1989183/51‑1 ACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAG < 1:9438877/51‑1 ACATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAG < 1:7361147/51‑1 CATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGT < 1:2774619/51‑1 CATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAG < 1:9548600/50‑1 ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC > 1:1484452/1‑51 ATTTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTC < 1:4069828/51‑1 TTTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGA < 1:9335238/51‑1 TTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC < 1:3715173/51‑1 TTGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC < 1:1342280/51‑1 TGGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGAC > 1:6777194/1‑50 GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT < 1:1404621/51‑1 GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT < 1:7678114/51‑1 GGGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACAT < 1:7758485/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:8015920/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:1087318/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:7013074/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG < 1:9131746/51‑1 GGGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATG > 1:5039772/1‑51 GGTCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGG < 1:4402787/51‑1 TCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCA < 1:8817170/51‑1 TCAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCA > 1:8208952/1‑51 CAGTACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCAT > 1:7143536/1‑51 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT > 1:8756496/1‑51 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT < 1:446010/51‑1 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT < 1:1756537/51‑1 TACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCT < 1:382861/51‑1 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC > 1:3489236/1‑51 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC < 1:5825245/51‑1 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC > 1:5277306/1‑51 ACATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTC < 1:9956372/51‑1 CATTGAGGGGTTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC < 1:6067301/51‑1 |||||||||||| CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666085‑666133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTGAGGGGCTTTCTTGCCGTGATTGTCAGGAGTCGACATGGCATCCTCC < REL606/3537178‑3537129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |