Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | REL606 | 547,700 | Δ8,125 bp | 100% | IS1‑mediated | [nmpC]–[ECB_00513] | [nmpC], ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513] |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 546956–547698 | 555824–555805 | 8108–8869 | 55 [50] | [0] 158 | [insB‑6]–[ECB_00513] | [insB‑6],insA‑6,nmpC,ybcR,ybcS,ybcT,ybcU,ECB_00510,nohB,ECB_00512,[ECB_00513] |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 547699 | NA (NA) | 101 (1.060) | 59/80 | NT | 100% | noncoding (1/768 nt) | IS1 | repeat region |
? | REL606 | 555825 = | 0 (0.000) | coding (1110/2346 nt) | ECB_00513 | conserved hypothetical protein |
Only 100 of 158 total aligned reads displayed.
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/547650‑547699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAA > REL606/555825‑555874 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:10062631/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:8495982/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:8342325/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC > 1:7597679/1‑51 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:7031079/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:609824/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:5808188/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC > 1:5102185/1‑51 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:4220964/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:395989/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:268528/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC > 1:2529639/1‑51 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:180367/51‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:2768996/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG < 1:1250115/51‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG < 1:3822662/51‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:10328923/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:4289823/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG < 1:891448/51‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:3168289/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:7926408/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:6176386/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCG > 1:2407354/1‑51 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:8739050/50‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGA > 1:5652477/1‑51 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGA < 1:7596575/51‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGA < 1:240348/51‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGA < 1:7206043/51‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGA > 1:7273152/1‑51 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGA < 1:9324988/51‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT < 1:8798555/51‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT < 1:7447324/51‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGAT > 1:10479744/1‑51 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATT < 1:74676/51‑1 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTC > 1:6294574/1‑51 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTC > 1:1621587/1‑51 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTC > 1:8893070/1‑51 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCA > 1:9372244/1‑51 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCA > 1:7399001/1‑51 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCAC > 1:8279647/1‑51 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTG > 1:8375646/1‑51 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTG < 1:2593732/51‑1 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGG < 1:407544/51‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATAT < 1:3978640/51‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATAT > 1:5107158/1‑51 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATAT < 1:1598798/51‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATAT < 1:1310880/51‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATG < 1:3233192/51‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATG < 1:10438732/51‑1 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATG > 1:9042189/1‑51 TCATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGC < 1:7073509/51‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCT > 1:7753321/1‑51 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTT > 1:5127369/1‑51 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTT < 1:9260099/51‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTT < 1:5479435/51‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTT < 1:7534207/51‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTT < 1:10719563/51‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTG > 1:3449045/1‑51 TACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTG < 1:5859670/51‑1 ACACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGC > 1:6688990/1‑51 ACTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTG < 1:2481877/51‑1 CTAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGG > 1:4468490/1‑51 TAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGC > 1:1820596/1‑51 TAAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGC < 1:2233541/51‑1 AAATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCT < 1:1665137/51‑1 ATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTT > 1:2136808/1‑51 ATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTT < 1:4685838/51‑1 ATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTT < 1:9386562/51‑1 ATCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTT < 1:5020752/51‑1 TCAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTT < 1:2964389/51‑1 CAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTC < 1:5203816/51‑1 CAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTC < 1:4051276/51‑1 CAGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTC > 1:10235738/1‑51 AGTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCG < 1:1358649/51‑1 GTAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGC > 1:738546/1‑51 TAAGTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCC < 1:2192818/51‑1 GTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGG > 1:3509874/1‑51 GTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGG < 1:6945203/51‑1 GTTGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGG < 1:10874213/51‑1 TGGCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTT < 1:904867/51‑1 GCAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTAT < 1:1347727/51‑1 CAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATA > 1:10152211/1‑51 CAGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATA < 1:7824114/51‑1 AGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 1:7297584/51‑1 AGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 1:472533/51‑1 AGCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAA < 1:4195708/51‑1 GCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAG > 1:3849039/1‑51 GCATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAG < 1:7801668/51‑1 CATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGC > 1:809779/1‑51 ATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCA > 1:9886384/1‑51 ATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCA < 1:4356703/51‑1 ATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCA > 1:5825882/1‑51 ATCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCA > 1:3778161/1‑51 TCACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAA < 1:3713872/51‑1 ACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAAT < 1:10928160/51‑1 ACCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAAT < 1:6951094/51‑1 CCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATA < 1:914973/51‑1 CCCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATA > 1:7749921/1‑51 CCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAA > 1:6210412/1‑51 CCGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAA < 1:2743902/51‑1 CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/547650‑547699 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGATTCACTGGATATGCTTGCTGGCTTTTCGCCTGGTTATAAGCAAATAA > REL606/555825‑555874 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |