New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 18002 = | 0 (0.000) | 97 (1.020) | 54/80 | NT | 100% | coding (515/1167 nt) | nhaA | pH‑dependent sodium/proton antiporter |
? | REL606 | 588495 = | NA (NA) | noncoding (1/1977 nt) | IS150 | repeat region |
Only 100 of 110 total aligned reads displayed.
AGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/18051‑18002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > REL606/588495‑588541 AGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGT > 1:178576/1‑51 AGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGT < 1:6936591/51‑1 GCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTG < 1:3217304/51‑1 GCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTG < 1:9067070/51‑1 CCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGT > 1:3468999/1‑51 CCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGT < 1:1745469/51‑1 CGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTA > 1:158461/1‑51 GCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTAC < 1:5730205/51‑1 GCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTAC > 1:10372676/1‑51 GACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTG < 1:8764058/51‑1 GACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTG > 1:3031532/1‑51 GACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTG > 1:8514713/1‑51 GACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTG > 1:3378579/1‑51 GACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTAC < 1:2508305/49‑1 ACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 1:8760929/1‑51 ACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 1:2007798/1‑51 ACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC > 1:9630782/1‑51 ACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGC < 1:1036025/51‑1 CGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCA < 1:753838/51‑1 GCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCAC > 1:373434/1‑51 GCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCAC > 1:6895784/1‑51 CCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACC > 1:9490412/1‑51 CAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCC < 1:215773/51‑1 CAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACC < 1:5871268/50‑1 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCA < 1:8098479/51‑1 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCA < 1:8957867/51‑1 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCA > 1:2538871/1‑51 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCA < 1:8706205/51‑1 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCA > 1:5691278/1‑51 AAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCA > 1:4070530/1‑51 AGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCAT < 1:4401352/51‑1 GAGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATT < 1:8701651/51‑1 AGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTT < 1:5212489/51‑1 AGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTT < 1:5153194/51‑1 AGAGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTT < 1:558243/51‑1 GAGGCCATCAATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTT > 1:5888895/1‑51 AGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTG < 1:73581/51‑1 AGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTG < 1:3114566/51‑1 AGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTG > 1:7507668/1‑51 AGGCCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTG > 1:2881537/1‑51 CCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTG < 1:4193978/51‑1 CCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTG < 1:3349240/51‑1 CCATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTG > 1:4006197/1‑51 CATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG > 1:7108468/1‑51 CATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG > 1:4080227/1‑51 CATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGG > 1:4312539/1‑51 ATCGATAAGTCATTAGTGTGGAACAATGTGTACTGCACCCATTTTGTTGGA < 1:5786359/51‑1 ATCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGA < 1:82956/51‑1 TCGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGAC < 1:5121930/51‑1 CGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACG > 1:5368504/1‑51 CGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACG > 1:952966/1‑51 CGATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACG > 1:3149095/1‑51 GATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGA < 1:4790929/51‑1 ATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGAT > 1:3757464/1‑51 ATAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGAT > 1:10469065/1‑51 TAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATG < 1:9617011/51‑1 TAAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATG < 1:10684033/51‑1 AAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGA > 1:4449971/1‑51 AAGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGA < 1:6850855/51‑1 AAGTCATTAGTGTAGAACAATATGTACTGCACCCATTTTGTTGGACGATGA > 1:7045498/1‑51 AGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:5800155/51‑1 AGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:8762880/51‑1 AGTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAA < 1:6406224/51‑1 GTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAA > 1:3735482/1‑51 GTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:9177007/51‑1 GTCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAA < 1:9572905/51‑1 TCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:6419578/1‑51 TCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:6909003/51‑1 TCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:2261168/1‑51 TCATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:468826/51‑1 CATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:3237715/51‑1 CATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATG < 1:4613610/51‑1 ATTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:5445771/1‑51 TTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:7224218/1‑51 TTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:9808111/1‑51 TTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:10163340/51‑1 TTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:692623/51‑1 TTAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGA < 1:7776663/51‑1 TAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:4771664/1‑51 TAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:10910566/51‑1 TAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:10707245/51‑1 TAGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:6244151/51‑1 AGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:10296635/51‑1 AGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:1897916/51‑1 AGTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:10717968/1‑51 GTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA > 1:6315713/1‑51 GTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:5607464/51‑1 GTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:7388857/51‑1 GTGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:706233/51‑1 TGTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:7777995/1‑51 GTAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:4746362/1‑51 TAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC < 1:10280112/51‑1 TAGAACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:9671556/1‑51 AACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:4046259/1‑51 AACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:8303043/1‑51 AACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:6473989/1‑51 AACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:5729368/1‑51 ACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 1:2840853/1‑51 ACAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:10472194/51‑1 CAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:8153248/1‑51 AGCCGCGACGCCAAGAGAGGCCATCGATAAGTCATTAGTGTAGAACAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/18051‑18002 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > REL606/588495‑588541 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |