| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | REL606 | 1,915,101 | Δ1 bp | 100% | intergenic (‑211/‑127) | zwf ← / → yebK | glucose‑6‑phosphate 1‑dehydrogenase/predicted DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 1,915,101 | 0 | A | . | 100.0% | 593.5 / NA | 120 | intergenic (‑211/‑127) | zwf/yebK | glucose‑6‑phosphate 1‑dehydrogenase/predicted DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (54/66); total (54/66) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 148 total aligned reads displayed.
AAAAATCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGCAC > REL606/1915051‑1915147 | aaaaaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGa < 1:3263605/51‑1 (MQ=255)aaaaaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATATTATGa < 1:7600929/51‑1 (MQ=255) aaaaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaa > 1:9929339/1‑51 (MQ=255) aaaaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaa < 1:5350240/51‑1 (MQ=255) aaaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaa < 1:1402362/51‑1 (MQ=255) aaaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaa > 1:8986030/1‑51 (MQ=255) aaTCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaa < 1:2487136/51‑1 (MQ=255) atcatcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaa < 1:3916357/51‑1 (MQ=255) atcatcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaa > 1:7583671/1‑51 (MQ=255) tcatcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaa > 1:9239272/1‑51 (MQ=255) tcatcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaa < 1:10482110/51‑1 (MQ=255) tcatcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaa < 1:1727439/51‑1 (MQ=255) tcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaaata < 1:10034442/51‑3 (MQ=255) tcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaaata < 1:4365813/51‑3 (MQ=255) tcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaaata > 1:7430227/1‑49 (MQ=255) tcGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaa > 1:6833857/1‑45 (MQ=255) cGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaaataa > 1:6342488/1‑48 (MQ=255) cGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaaataa > 1:10882168/1‑48 (MQ=255) gTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGaaaaaaataac < 1:4734050/51‑5 (MQ=255) ttttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaaca > 1:9745749/1‑51 (MQ=255) ttttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaaca > 1:1882021/1‑51 (MQ=255) ttttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaaca < 1:643904/51‑1 (MQ=255) ttttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaaca > 1:9415199/1‑51 (MQ=255) ttttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaaca > 1:8504981/1‑51 (MQ=255) tttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaa > 1:1821478/1‑51 (MQ=255) tttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaa < 1:7933558/51‑1 (MQ=255) ttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaac < 1:7404880/51‑1 (MQ=255) ttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaac > 1:7932272/1‑51 (MQ=255) ttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaac < 1:4545611/51‑1 (MQ=255) ttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaac < 1:557686/51‑1 (MQ=255) ttCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATaacaac > 1:10204903/1‑51 (MQ=255) tCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACt < 1:3413611/51‑1 (MQ=255) tCCATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACt < 1:9047129/51‑1 (MQ=255) cATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttt > 1:10012398/1‑51 (MQ=255) cATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttt < 1:1905892/51‑1 (MQ=255) cATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttt > 1:4668222/1‑51 (MQ=255) cATTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttt < 1:8144275/51‑1 (MQ=255) aTTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACtttt > 1:9141408/1‑51 (MQ=255) aTTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACtttt > 1:3559491/1‑51 (MQ=255) aTTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACtttt > 1:4509089/1‑51 (MQ=255) aTTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACtttt > 1:2138802/1‑51 (MQ=255) aTTCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACtttt < 1:7292732/51‑1 (MQ=255) ttCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttttt < 1:8199980/51‑1 (MQ=255) ttCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttttt < 1:8546468/51‑1 (MQ=255) ttCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttttt < 1:10743631/51‑1 (MQ=255) ttCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACttttt > 1:6535620/1‑51 (MQ=255) tCGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACtttttt < 1:3812821/51‑1 (MQ=255) cGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTa < 1:1355123/51‑1 (MQ=255) cGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTa < 1:9638244/51‑1 (MQ=255) cGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTa < 1:5485934/51‑1 (MQ=255) ggTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTAt > 1:5007073/1‑51 (MQ=255) ggTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTAt < 1:7168370/51‑1 (MQ=255) ggTAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTAt < 1:3988862/51‑1 (MQ=255) tAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCt < 1:2921667/51‑1 (MQ=255) tAAAAATCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCt < 1:2854384/51‑1 (MQ=255) aaaaaTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTg > 1:9908045/1‑51 (MQ=255) aaaaTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGc < 1:1140693/51‑1 (MQ=255) aaaaTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGc > 1:1976768/1‑51 (MQ=255) aaaTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCt < 1:2526279/51‑1 (MQ=255) aaaTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCt < 1:6976104/51‑1 (MQ=255) aTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCttt < 1:7302481/51‑1 (MQ=255) aTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCttt > 1:2027466/1‑51 (MQ=255) aTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCttt > 1:4888048/1‑51 (MQ=255) aTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCttt > 1:3053158/1‑51 (MQ=255) aTCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCttt < 1:5300930/51‑1 (MQ=255) tCTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCtttt > 1:3608990/1‑51 (MQ=255) cTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTg < 1:4475824/51‑1 (MQ=255) cTGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTg > 1:4176644/1‑51 (MQ=255) cTGACACTGAACATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTg > 1:6822515/1‑51 (MQ=38) tGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGt > 1:3227758/1‑51 (MQ=255) tGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGt > 1:10330600/1‑51 (MQ=255) tGACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGt < 1:4724122/51‑1 (MQ=255) gACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTc < 1:7325226/51‑1 (MQ=255) gACACTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTc > 1:9609053/1‑51 (MQ=255) acacTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCa > 1:2825490/1‑51 (MQ=255) cacTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCAt < 1:5427186/51‑1 (MQ=255) acTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCAtt < 1:18501/51‑1 (MQ=255) acTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCAtt > 1:6753626/1‑51 (MQ=255) cTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTa > 1:5864407/1‑51 (MQ=255) cTGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTa > 1:8068935/1‑51 (MQ=255) tGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTaa > 1:720382/1‑51 (MQ=255) tGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTaa > 1:10714080/1‑51 (MQ=255) tGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTaa > 1:2194926/1‑51 (MQ=255) tGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTaa < 1:10321878/51‑1 (MQ=255) tGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTaa > 1:975400/1‑51 (MQ=255) tGATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTaa < 1:5766047/51‑1 (MQ=255) gATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAac > 1:5014639/1‑51 (MQ=255) gATCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAac < 1:168760/51‑1 (MQ=255) aTCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAaca < 1:5665026/51‑1 (MQ=255) tCATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAacac > 1:1309815/1‑51 (MQ=255) cATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACg < 1:4345108/51‑1 (MQ=255) cATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACg < 1:3853203/51‑1 (MQ=255) cATGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACg < 1:5081714/51‑1 (MQ=255) aTGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACgg > 1:6238553/1‑51 (MQ=255) tGTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGc > 1:722790/1‑51 (MQ=255) gTTATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGca > 1:805518/1‑51 (MQ=255) ttATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGcac > 1:4885206/1‑51 (MQ=255) ttATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGcac > 1:6591233/1‑51 (MQ=255) ttATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGcac > 1:4093388/1‑51 (MQ=255) ttATG‑AAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGcac < 1:9490897/51‑1 (MQ=255) | AAAAATCATCGTTTTCCATTCGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCTGCTTTTGTCATTAACACGGCAC > REL606/1915051‑1915147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |