Predicted mutation
evidence seq id position mutation annotation gene description
RA REL606 45,662 C→T V155I (GTC→ATC)  caiT ← L‑carnitine/gamma‑butyrobetaine antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*REL60645,6620CT100.0% 296.2 / NA 84V155I (GTC→ATC) caiTL‑carnitine/gamma‑butyrobetaine antiporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (46/38);  total (46/38)

GGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGAAC  >  REL606/45614‑45708
                                                |                                              
ggCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTg                                              <  1:5553754/51‑1 (MQ=255)
ggCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTg                                              <  1:6622082/51‑1 (MQ=255)
 gCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGa                                             <  1:4629950/51‑1 (MQ=255)
 gCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGa                                             >  1:5782900/1‑51 (MQ=255)
  cGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGaa                                            <  1:4851363/51‑1 (MQ=255)
  cGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGaa                                            <  1:4539465/51‑1 (MQ=255)
  cGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGaa                                            <  1:3978796/51‑1 (MQ=255)
   gAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGaaa                                           >  1:3101536/1‑51 (MQ=255)
   gAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGaaa                                           <  1:397218/51‑1 (MQ=255)
   gAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGaaa                                           >  1:2232513/1‑51 (MQ=255)
    aaTCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAg                                          <  1:5413112/51‑1 (MQ=255)
    aaTCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAg                                          <  1:6557156/51‑1 (MQ=255)
    aaTCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAg                                          <  1:6364210/51‑1 (MQ=255)
    aaTCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAg                                          <  1:834817/51‑1 (MQ=255)
     aTCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAgg                                         <  1:6830428/51‑1 (MQ=255)
      tCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGa                                        <  1:5815863/51‑1 (MQ=255)
      tCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGa                                        >  1:860155/1‑51 (MQ=255)
       cACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGaa                                       <  1:1189485/51‑1 (MQ=255)
        aCTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAg                                      >  1:973108/1‑51 (MQ=255)
        aCTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAg                                      >  1:4824590/1‑51 (MQ=255)
         cTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGTAAGGAAGc                                     >  1:5892003/1‑51 (MQ=255)
         cTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGc                                     <  1:5150109/51‑1 (MQ=255)
         cTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGc                                     >  1:4740408/1‑51 (MQ=255)
         cTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGc                                     >  1:6227074/1‑51 (MQ=255)
         cTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGc                                     >  1:4159703/1‑51 (MQ=255)
          ttCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCt                                    <  1:5750167/51‑1 (MQ=255)
          ttCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCt                                    >  1:2526625/1‑51 (MQ=255)
           tCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTg                                   >  1:7229855/1‑51 (MQ=255)
           tCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTg                                   <  1:4802400/51‑1 (MQ=255)
            ccATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGt                                  >  1:4571739/1‑51 (MQ=255)
            ccATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGt                                  >  1:4863193/1‑51 (MQ=255)
            ccATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGt                                  >  1:7109651/1‑51 (MQ=255)
            ccATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGt                                  <  1:6619727/51‑1 (MQ=255)
             cATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTa                                 <  1:2394720/51‑1 (MQ=255)
              aTTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTaa                                >  1:2563357/1‑51 (MQ=255)
               ttttGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAg                               >  1:869639/1‑51 (MQ=255)
                tttGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGt                              >  1:6823913/1‑51 (MQ=255)
                tttGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGt                              >  1:5207792/1‑51 (MQ=255)
                 ttGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTg                             <  1:1607846/51‑1 (MQ=255)
                 ttGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTg                             >  1:4472793/1‑51 (MQ=255)
                  tGCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTgg                            >  1:2427073/1‑51 (MQ=255)
                   gCGGACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGc                           >  1:2421488/1‑51 (MQ=255)
                      gACAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCa                        >  1:6473923/1‑51 (MQ=255)
                       aCAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCAc                       >  1:6382099/1‑51 (MQ=255)
                        cAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACg                      >  1:4054957/1‑51 (MQ=255)
                        cAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACg                      >  1:4467499/1‑51 (MQ=255)
                        cAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACg                      <  1:5480583/51‑1 (MQ=255)
                        cAAAGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACg                      <  1:5427878/51‑1 (MQ=255)
                         aaaGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACgg                     <  1:1277837/51‑1 (MQ=255)
                         aaaGAAGAAGTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACgg                     <  1:8498/51‑1 (MQ=255)
                          aagaagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGc                    >  1:1045965/1‑51 (MQ=255)
                          aagaagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGc                    >  1:5045263/1‑51 (MQ=255)
                           agaagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCa                   <  1:3857151/51‑1 (MQ=255)
                           agaagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCa                   >  1:88079/1‑51 (MQ=255)
                           agaagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCa                   <  1:1629218/51‑1 (MQ=255)
                            gaagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCag                  <  1:6941330/51‑1 (MQ=255)
                             aagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCaga                 <  1:2108431/51‑1 (MQ=255)
                             aagaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCaga                 >  1:1480090/1‑51 (MQ=255)
                              agaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCagag                >  1:2630102/1‑51 (MQ=255)
                              agaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCagag                >  1:5048615/1‑51 (MQ=255)
                              agaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCagag                >  1:3853397/1‑51 (MQ=255)
                               gaagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAgg               >  1:1451493/1‑51 (MQ=255)
                                aagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGt              >  1:5230214/1‑51 (MQ=255)
                                aagTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGt              >  1:6884751/1‑51 (MQ=255)
                                 agTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTc             <  1:6702622/51‑1 (MQ=255)
                                  gTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTcc            <  1:86567/51‑1 (MQ=255)
                                  gTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTcc            >  1:3690683/1‑51 (MQ=255)
                                  gTAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTcc            <  1:2026053/51‑1 (MQ=255)
                                   tAAGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTccc           >  1:794075/1‑51 (MQ=255)
                                    aaGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTcccc          >  1:3361606/1‑51 (MQ=255)
                                     aGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCa         >  1:2406555/1‑51 (MQ=255)
                                     aGCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCa         >  1:5426769/1‑51 (MQ=255)
                                      gCGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAg        >  1:5088924/1‑51 (MQ=255)
                                       cGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGt       >  1:615969/1‑51 (MQ=255)
                                       cGAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGt       >  1:1492617/1‑51 (MQ=255)
                                        gAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTg      <  1:4770052/51‑1 (MQ=255)
                                        gAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTg      <  1:4866541/51‑1 (MQ=255)
                                        gAAGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTg      <  1:2559548/51‑1 (MQ=255)
                                          aGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGa    <  1:4466824/51‑1 (MQ=255)
                                          aGGCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGa    >  1:6589629/1‑51 (MQ=255)
                                           ggCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGaa   <  1:1608889/51‑1 (MQ=255)
                                            gCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGAAc  >  1:5474097/1‑51 (MQ=255)
                                            gCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGAAc  <  1:901412/51‑1 (MQ=255)
                                            gCGATTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGAAc  <  1:1160133/51‑1 (MQ=255)
                                                |                                              
GGCGAATCACTTCCATTTTGCGGACAAAGAAGAAGTAAGCGAAGGCGACTGAAAGGAAGCTGTAAGTGGCCCACGGCAGAGGTCCCCAGTGGAAC  >  REL606/45614‑45708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: