Predicted mutation
evidence seq id position mutation annotation gene description
MC JC JC REL606 490,484 IS150 (+) Δ1 bp :: +CATT intergenic (‑37/+24) ybbN ← / ← ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 490484 490484 1 80 [0] [0] 99 ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 4904830 (0.000)80 (1.000) 57/100 0.1 100% intergenic (‑36/+25) ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase
?REL606 = 2775877 NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 490485 =0 (0.000)91 (1.220)
+AAT		 54/94 0.1 100% intergenic (‑38/+23) ybbN/ybbO predicted thioredoxin domain‑containing protein/short chain dehydrogenase
?REL606 = 590472 NA (NA)intergenic (+27/‑71) insK‑1/hokE IS150 putative transposase; b3558_1/toxic polypeptide, small

TTTTCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATGGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATC  >  REL606/490434‑490532
                                                 |                                                 
ttttCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATt                                                  <  1:1566522‑M1/51‑2 (MQ=255)
ttttCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATt                                                  >  1:5757899‑M1/1‑50 (MQ=255)
 tttCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtg                                                 >  1:4468486‑M1/1‑49 (MQ=255)
 tttCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtg                                                 >  1:2269557‑M1/1‑49 (MQ=255)
  ttCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgt                                                <  1:4538438‑M1/51‑4 (MQ=255)
  ttCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgt                                                >  1:4357121‑M1/1‑48 (MQ=255)
    cTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtac                                              >  1:3804751‑M1/1‑46 (MQ=255)
       cGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgc                                           >  1:2513226‑M1/1‑43 (MQ=255)
       cGGACATGGAGTCGCTATCTGTTGTCGATATTTTCTTTGACATtgtact                                             <  1:2389018‑M1/49‑7 (MQ=255)
        ggACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgca                                          <  1:4503087‑M1/51‑10 (MQ=255)
          aCATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacc                                        <  1:5137577‑M1/51‑12 (MQ=255)
          aCATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacc                                        >  1:6990731‑M1/1‑40 (MQ=255)
           cATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcaccc                                       >  1:2433981‑M1/1‑39 (MQ=255)
            aTGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcaccca                                      >  1:1225460‑M1/1‑38 (MQ=255)
            aTGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcaccca                                      <  1:6340895‑M1/51‑14 (MQ=255)
              ggAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccatt                                    <  1:2061210‑M1/51‑16 (MQ=255)
              ggAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccatt                                    >  1:2977642‑M1/1‑36 (MQ=255)
              ggAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccatt                                    >  1:83355‑M1/1‑36 (MQ=255)
              ggAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccatt                                    <  1:2063428‑M1/51‑16 (MQ=255)
                aGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccatttt                                  >  1:2246215‑M1/1‑34 (MQ=255)
                aGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccatttt                                  <  1:986646‑M1/51‑18 (MQ=255)
                aGTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattt                                   <  1:3072828‑M1/50‑17 (MQ=255)
                 gTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattttg                                 >  1:4735085‑M1/1‑33 (MQ=255)
                 gTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattttg                                 <  1:1595081‑M1/51‑19 (MQ=255)
                 gTCGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattttg                                 <  1:1164230‑M1/51‑19 (MQ=255)
                   cGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgtt                               >  1:7281580‑M1/1‑31 (MQ=255)
                   cGCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgt                                <  1:293903‑M1/50‑20 (MQ=255)
                    gCTCTCTGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttg                              >  1:2193485‑M1/1‑30 (MQ=255)
                     ctctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgg                             <  1:5700674‑M1/51‑23 (MQ=255)
                     ctctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgg                             >  1:1789527‑M1/1‑29 (MQ=255)
                     ctctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgg                             >  1:499515‑M1/1‑29 (MQ=255)
                      tctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgga                            >  1:4216167‑M1/1‑28 (MQ=255)
                      tctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgga                            >  1:5261531‑M1/1‑28 (MQ=255)
                      tctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgga                            >  1:4184773‑M1/1‑28 (MQ=255)
                      tctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttgga                            >  1:4184393‑M1/1‑28 (MQ=255)
                       ctctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttggac                           <  1:6938712‑M1/51‑25 (MQ=255)
                        tctGTTGTCGATATTTTCTTTGACATtgtactgcacccattttgttggacg                          <  1:6079403‑M1/51‑26 (MQ=255)
                          tgttgtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgat                        <  1:4116081‑M1/51‑28 (MQ=255)
                          tgttgtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgat                        >  1:6168810‑M1/1‑24 (MQ=255)
                          tgttgtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgat                        >  1:6984873‑M1/1‑24 (MQ=255)
                           gttgtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgatg                       <  1:781862‑M1/51‑29 (MQ=255)
                           gttgtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgatg                       <  1:1863868‑M1/51‑29 (MQ=255)
                            ttgtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgatga                      >  1:3250697‑M1/1‑22 (MQ=255)
                              gtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgatgaaa                    <  1:3807015‑M1/51‑32 (MQ=255)
                              gtCGATATTTTCTTTGACATtgtactgcacccattttgttggacgatgaaa                    <  1:7148195‑M1/51‑32 (MQ=255)
                               tCGATATTTTCTTTGACATtgtactgcacccattttgttggacgatgaaat                   >  1:421080‑M1/1‑19 (MQ=255)
                                 gATATTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatgg                 <  1:4926762‑M1/51‑35 (MQ=255)
                                  atatTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatgga                <  1:5193635‑M1/51‑36 (MQ=255)
                                  atatTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatgga                >  1:5138956‑M1/1‑16 (MQ=255)
                                  atatTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatgga                <  1:7027566‑M1/51‑36 (MQ=255)
                                   tatTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatggaa               >  1:2904269‑M1/1‑15 (MQ=255)
                                   tatTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatggaa               >  1:1617280‑M1/1‑15 (MQ=255)
                                    atTTTCTTTGACATtgtactgcacccattttgttggacgatgaaatggaat              <  1:2706229‑M1/51‑38 (MQ=255)
                                     ttttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaata             >  1:7216520‑M1/1‑13 (MQ=255)
                                     ttttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaata             <  1:5474315‑M1/51‑39 (MQ=255)
                                     ttttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaata             >  1:3743842‑M1/1‑13 (MQ=255)
                                     ttttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaata             <  1:3817264‑M1/51‑39 (MQ=255)
                                       ttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagc           >  1:1035273‑M1/1‑11 (MQ=255)
                                       ttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagc           <  1:3276124‑M1/51‑41 (MQ=255)
                                       ttCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagc           >  1:1469390‑M1/1‑11 (MQ=255)
                                        tCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagcc          <  1:5974585‑M1/51‑42 (MQ=255)
                                        tCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagcc          >  1:5456238‑M1/1‑10 (MQ=255)
                                        tCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagcc          >  1:88483‑M1/1‑10 (MQ=255)
                                        tCTTTGACATtgtactgcacccattttgttggacgatgaaatggaatagcc          >  1:1244799‑M1/1‑10 (MQ=255)
                                           ttGACATtgtactgcacccattttgttggacgatgaaatggaatagcccct       >  1:4657348‑M1/1‑7 (MQ=255)
                                           ttGACATtgtactgcacccattttgttggacgatgaaatggaatagcccct       <  1:643669‑M1/51‑45 (MQ=255)
                                            tGACATtgtactgcacccattttgttggacgatgaaatggaatagccccta      <  1:8207‑M1/51‑46 (MQ=255)
                                            tGACATtgtactgcacccattttgttggacgatgaaatggaatagccccta      >  1:1844433‑M1/1‑6 (MQ=255)
                                             gACATtgtactgcacccattttgttggacgatgaaatggaatagcccctaa     >  1:1075283‑M1/1‑5 (MQ=255)
                                             gACATtgtactgcacccattttgttggacgatgaaatggaatagcccctaa     <  1:5724616‑M1/51‑47 (MQ=255)
                                             gACATtgtactgcacccattttgttggacgatgaaatggaatagcccctaa     <  1:6745033‑M1/51‑47 (MQ=255)
                                              aCATtgtactgcacccattttgttggacgatgaaatggaatagcccctaat    >  1:6249737‑M1/1‑4 (MQ=255)
                                               cATtgtactgcacccattttgttggacgatgaaatggaatagcccctaata   <  1:1445013‑M1/51‑49 (MQ=255)
                                               cATtgtactgcacccattttgttggacgatgaaatggaatagcccctaata   <  1:4209694‑M1/51‑49 (MQ=255)
                                               cATtgtactgcacccattttgttggacgatgaaatggaatagcccctaat    <  1:5545473‑M1/50‑48 (MQ=255)
                                                aTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat  <  1:5416890‑M1/51‑50 (MQ=255)
                                                aTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat  <  1:2916268‑M1/51‑50 (MQ=255)
                                                aTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat  <  1:871519‑M1/51‑50 (MQ=255)
                                                aTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat  <  1:5771916‑M1/51‑50 (MQ=255)
                                                aTtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat  >  1:3958902‑M1/1‑2 (MQ=255)
                                                 |                                                 
TTTTCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATGGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATC  >  REL606/490434‑490532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑