| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,196,656 | IS150 (–) +3 bp | coding (1350‑1352/1992 nt) | cirA ← | ferric iron‑catecholate outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 97 (1.240) | 53/98 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 2196658 | 0 (0.000) | coding (1350/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter | |||||
| * | ? | REL606 | 2196656 = | 0 (0.000) | 83 (1.040) | 48/100 | 0.4 | 100% | coding (1352/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter |
| ? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 177 total aligned reads displayed.
CAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAGG > REL606/2196608‑2196707 | tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:1000229‑M1/49‑51 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttg < 1:3290688‑M1/4‑2 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGttt < 1:6128493‑M1/4‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga > 1:1646548‑M1/47‑49 (MQ=255) gCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtg < 1:1135070‑M2/51‑3 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacagttgat > 1:6596842‑M1/46‑48 (MQ=255) ccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgt > 1:5439582‑M2/1‑48 (MQ=255) ccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgt > 1:6265568‑M2/1‑48 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta > 1:942978‑M2/1‑47 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta < 1:799162‑M2/51‑5 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg > 1:3155156‑M1/45‑51 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg > 1:2854718‑M1/45‑51 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac > 1:1486081‑M2/1‑46 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac > 1:1982895‑M2/1‑46 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac < 1:6497167‑M2/51‑6 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacagttgatag > 1:91044‑M1/44‑46 (MQ=255) tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtact > 1:7028268‑M2/1‑45 (MQ=255) cttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactg > 1:4274890‑M2/1‑44 (MQ=255) ttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactga < 1:594670‑M2/51‑9 (MQ=255) ttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactga > 1:2096658‑M2/1‑43 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCa > 1:4833910‑M1/39‑51 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc > 1:3654465‑M2/1‑41 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc < 1:2905870‑M2/51‑11 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc < 1:5173776‑M2/51‑11 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg > 1:1129640‑M1/38‑51 (MQ=255) aCCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccc > 1:1412517‑M2/1‑40 (MQ=255) aCCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacca > 1:4836354‑M2/1‑40 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGa > 1:1008873‑M1/37‑51 (MQ=255) cccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccc > 1:1926852‑M2/1‑39 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGAt < 1:1076161‑M1/16‑1 (MQ=255) ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca < 1:5745606‑M2/51‑14 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:5152718‑M1/12‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc < 1:376564‑M1/12‑1 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa > 1:847194‑M2/1‑37 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa > 1:6533262‑M2/1‑37 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa > 1:6147956‑M2/1‑37 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATcc < 1:2278839‑M1/18‑1 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:96677‑M2/51‑16 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:5766010‑M2/51‑16 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:1945723‑M2/51‑16 (MQ=255) tGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaa < 1:7073497‑M2/51‑17 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCg > 1:6813526‑M1/33‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:6980308‑M1/20‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:426549‑M1/20‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg > 1:6010329‑M1/32‑51 (MQ=255) gtagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaa < 1:3877151‑M2/51‑18 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag < 1:3480963‑M2/51‑19 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag < 1:775988‑M2/51‑19 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccc < 1:4674487‑M2/45‑13 (MQ=255) catcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCt < 1:4731080‑M1/23‑1 (MQ=255) catcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCt < 1:5015701‑M1/23‑1 (MQ=255) aaGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttgga > 1:3491981‑M2/1‑28 (MQ=255) gtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTAccc < 1:2590936‑M1/27‑1 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca > 1:2733340‑M1/24‑51 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:6687682‑M1/28‑1 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca > 1:6432268‑M1/24‑51 (MQ=255) cccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:2698521‑M1/28‑1 (MQ=255) ccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcac < 1:4970857‑M1/29‑1 (MQ=255) ccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcac > 1:44830‑M1/23‑51 (MQ=255) cccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagt < 1:32379‑M2/51‑28 (MQ=255) caacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcaca > 1:4603609‑M1/22‑51 (MQ=255) caacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcaca > 1:1740654‑M1/22‑51 (MQ=255) ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt > 1:5129278‑M2/1‑23 (MQ=255) ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt > 1:6497430‑M2/1‑23 (MQ=255) aacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACaa > 1:3079121‑M1/21‑51 (MQ=255) cAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtta > 1:1220943‑M2/1‑22 (MQ=255) cAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtta > 1:1877075‑M2/1‑22 (MQ=255) acaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAAt < 1:6323105‑M1/32‑1 (MQ=255) acaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAAt < 1:1027280‑M1/32‑1 (MQ=255) caaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATc < 1:3991994‑M1/33‑1 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:1363347‑M2/1‑21 (MQ=255) gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa > 1:2649736‑M2/1‑20 (MQ=255) cTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaac > 1:4620637‑M2/1‑19 (MQ=255) cTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaac > 1:2506300‑M2/1‑19 (MQ=255) aaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCtt < 1:4082585‑M1/35‑1 (MQ=255) tgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACa < 1:5270584‑M1/38‑1 (MQ=255) ccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacg > 1:6965849‑M2/1‑16 (MQ=255) ccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacg > 1:5172577‑M2/1‑16 (MQ=255) ggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATg > 1:57960‑M1/12‑51 (MQ=255) aaCTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgag > 1:7156526‑M2/1‑14 (MQ=255) aaCTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgag > 1:4748560‑M2/1‑14 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg > 1:6375556‑M1/10‑51 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg > 1:1427636‑M1/10‑51 (MQ=255) tttCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggca > 1:7102423‑M2/1‑11 (MQ=255) gcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcgc < 1:833293‑M1/43‑1 (MQ=255) tCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcata > 1:1712472‑M2/1‑9 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 1:6864309‑M2/51‑46 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:2448208‑M2/1‑6 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:1625703‑M2/51‑47 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:6255935‑M2/51‑47 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 1:6103454‑M2/1‑5 (MQ=255) caGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGc < 1:1791429‑M1/49‑1 (MQ=255) caGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGc < 1:6690427‑M1/49‑1 (MQ=255) ggTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:2164311‑M2/1‑4 (MQ=255) aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa > 1:5660815‑M1/2‑51 (MQ=255) aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa < 1:7215396‑M1/50‑1 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:5045679‑M2/1‑3 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:4928707‑M2/51‑49 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:4228061‑M2/1‑3 (MQ=255) tttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAgg > 1:2085901/1‑51 (MQ=255) | CAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAGG > REL606/2196608‑2196707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |