Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 2,196,656 | IS150 (–) +3 bp | coding (1350‑1352/1992 nt) | cirA ← | ferric iron‑catecholate outer membrane transporter |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 666130 | NA (NA) | 97 (1.240) | 53/98 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | = 2196658 | 0 (0.000) | coding (1350/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter | |||||
* | ? | REL606 | 2196656 = | 0 (0.000) | 83 (1.040) | 48/100 | 0.4 | 100% | coding (1352/1992 nt) | cirA | ferric iron‑catecholate outer membrane transporter |
? | REL606 | 3651091 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
Only 100 of 183 total aligned reads displayed.
CCAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAG > REL606/2196607‑2196706 | atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGt < 1:5661576‑M1/2‑1 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacagta > 1:4237492‑M1/49‑50 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:1000229‑M1/49‑51 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt > 1:6513350‑M1/49‑51 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttg < 1:3290688‑M1/4‑2 (MQ=255) attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGttt < 1:2657497‑M1/4‑1 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga > 1:1646548‑M1/47‑49 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTc < 1:4945236‑M1/5‑1 (MQ=255) ccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgt > 1:5439582‑M2/1‑48 (MQ=255) ccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgt > 1:6265568‑M2/1‑48 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta > 1:942978‑M2/1‑47 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta < 1:6941408‑M2/51‑5 (MQ=255) cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta < 1:799162‑M2/51‑5 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg < 1:4738320‑M1/7‑1 (MQ=255) ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac > 1:3629373‑M2/1‑46 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacagttgatag > 1:91044‑M1/44‑46 (MQ=255) tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtact > 1:7028268‑M2/1‑45 (MQ=255) tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTAGTTtgtact > 1:161062‑M2/1‑45 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGtt > 1:4671729‑M1/42‑51 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc > 1:610824‑M1/40‑51 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCa < 1:2094858‑M1/13‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCa > 1:4833910‑M1/39‑51 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc < 1:5173776‑M2/51‑11 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc > 1:6668840‑M2/1‑41 (MQ=255) cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc < 1:2905870‑M2/51‑11 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg < 1:3150392‑M1/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg > 1:1129640‑M1/38‑51 (MQ=255) aCCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccc > 1:1412517‑M2/1‑40 (MQ=255) ttccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGa > 1:1008873‑M1/37‑51 (MQ=255) cccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccc < 1:5933447‑M2/51‑13 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGAt < 1:1076161‑M1/16‑1 (MQ=255) ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca < 1:4270818‑M2/51‑14 (MQ=255) ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca < 1:5745606‑M2/51‑14 (MQ=255) cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa > 1:847194‑M2/1‑37 (MQ=255) catttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATcc < 1:2278839‑M1/18‑1 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:96677‑M2/51‑16 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:1945723‑M2/51‑16 (MQ=255) aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa < 1:4151688‑M2/51‑16 (MQ=255) tGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaa < 1:4065665‑M2/51‑17 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:6143729‑M1/20‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg < 1:6980308‑M1/20‑1 (MQ=255) gtagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaa < 1:3877151‑M2/51‑18 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCggg < 1:1905902‑M1/21‑1 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag < 1:775988‑M2/51‑19 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag > 1:5003448‑M2/1‑33 (MQ=255) tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag > 1:2514400‑M2/1‑33 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGc < 1:6469016‑M1/22‑1 (MQ=255) agtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagt > 1:4681205‑M2/1‑32 (MQ=255) taAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttg > 1:1972323‑M2/1‑30 (MQ=255) aaGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttgga > 1:5146083‑M2/1‑28 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca > 1:2733340‑M1/24‑51 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:6687682‑M1/28‑1 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca > 1:7098213‑M1/24‑51 (MQ=255) tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:4845549‑M1/28‑1 (MQ=255) cccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca < 1:2698521‑M1/28‑1 (MQ=255) ccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcac > 1:4773657‑M1/23‑51 (MQ=255) caacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcaca > 1:4603609‑M1/22‑51 (MQ=255) ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt > 1:6497430‑M2/1‑23 (MQ=255) ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt > 1:5129278‑M2/1‑23 (MQ=255) aacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACaa > 1:3079121‑M1/21‑51 (MQ=255) cAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtta > 1:1220943‑M2/1‑22 (MQ=255) acaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAAt < 1:1027280‑M1/32‑1 (MQ=255) acaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAAt < 1:6323105‑M1/32‑1 (MQ=255) caaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATc < 1:3991994‑M1/33‑1 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa < 1:6533694‑M2/51‑31 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:1363347‑M2/1‑21 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa > 1:3481866‑M2/1‑21 (MQ=255) aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa < 1:6409209‑M2/51‑31 (MQ=255) gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa > 1:2649736‑M2/1‑20 (MQ=255) gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa < 1:6173066‑M2/51‑32 (MQ=255) aaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCt < 1:7065939‑M1/34‑1 (MQ=255) tCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaaca < 1:5985214‑M2/51‑34 (MQ=255) aatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTa < 1:1628969‑M1/36‑1 (MQ=255) cccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacac < 1:7145125‑M2/51‑35 (MQ=255) tgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACa < 1:5270584‑M1/38‑1 (MQ=255) gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt < 1:4388059‑M1/39‑1 (MQ=255) gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt > 1:2769846‑M1/13‑51 (MQ=255) gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt > 1:3211913‑M1/13‑51 (MQ=255) cAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacna > 1:5169444‑M2/1‑15 (MQ=255) cAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacga < 1:2010120‑M2/51‑37 (MQ=255) gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc < 1:5773330‑M1/41‑1 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg < 1:1872989‑M1/42‑1 (MQ=255) tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg > 1:6375556‑M1/10‑51 (MQ=255) cagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAtgcgca > 1:1475344‑M1/8‑50 (MQ=255) tCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcata > 1:1712472‑M2/1‑9 (MQ=255) cGCTGGTTtgtactggccccaaaaagttggacagttaaacacgaggcatat < 1:1185236‑M2/51‑44 (MQ=255) cGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:6719600‑M2/51‑44 (MQ=255) cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:2448208‑M2/1‑6 (MQ=255) acaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACgg > 1:448787‑M1/4‑51 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg < 1:2482374‑M2/51‑47 (MQ=255) tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 1:6103454‑M2/1‑5 (MQ=255) ggTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:2164311‑M2/1‑4 (MQ=255) aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa < 1:7215396‑M1/50‑1 (MQ=255) aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa > 1:5660815‑M1/2‑51 (MQ=255) gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg > 1:3295144/1‑51 (MQ=255) gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg > 1:799529/1‑51 (MQ=255) gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg < 1:6844583/51‑1 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:1762606‑M2/51‑49 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc < 1:3706796‑M2/51‑49 (MQ=255) gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc > 1:5045679‑M2/1‑3 (MQ=255) | CCAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAG > REL606/2196607‑2196706 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |