Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 2,196,656 IS150 (–) +3 bp coding (1350‑1352/1992 nt) cirA ← ferric iron‑catecholate outer membrane transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 666130NA (NA)97 (1.240) 53/98 0.2 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 2196658 0 (0.000)coding (1350/1992 nt) cirA ferric iron‑catecholate outer membrane transporter
* ? REL606 2196656 =0 (0.000)83 (1.040) 48/100 0.4 100% coding (1352/1992 nt) cirA ferric iron‑catecholate outer membrane transporter
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

Only 100 of 183 total aligned reads displayed.

CCAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAG  >  REL606/2196607‑2196706
                                                 |                                                  
atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGt                                                   <  1:5661576‑M1/2‑1 (MQ=255)
 tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacagta                                                  >  1:4237492‑M1/49‑50 (MQ=255)
 tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt                                                  >  1:1000229‑M1/49‑51 (MQ=255)
 tattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGtt                                                  >  1:6513350‑M1/49‑51 (MQ=255)
  attaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttg                                                 <  1:3290688‑M1/4‑2 (MQ=255)
  attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGttt                                                 <  1:2657497‑M1/4‑1 (MQ=255)
   ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacagttga                                                >  1:1646548‑M1/47‑49 (MQ=255)
   ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTc                                                <  1:4945236‑M1/5‑1 (MQ=255)
    ccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgt                                               >  1:5439582‑M2/1‑48 (MQ=255)
    ccTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgt                                               >  1:6265568‑M2/1‑48 (MQ=255)
     cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta                                              >  1:942978‑M2/1‑47 (MQ=255)
     cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta                                              <  1:6941408‑M2/51‑5 (MQ=255)
     cttcttCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgta                                              <  1:799162‑M2/51‑5 (MQ=255)
     aggggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTg                                              <  1:4738320‑M1/7‑1 (MQ=255)
      ttcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtac                                             >  1:3629373‑M2/1‑46 (MQ=255)
      ggggctattccatttcatcgtccaacaaaatgggtgcagtacagttgatag                                             >  1:91044‑M1/44‑46 (MQ=255)
       tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtact                                            >  1:7028268‑M2/1‑45 (MQ=255)
       tcttcACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTAGTTtgtact                                            >  1:161062‑M2/1‑45 (MQ=255)
        ggctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGtt                                           >  1:4671729‑M1/42‑51 (MQ=255)
          ctattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTc                                         >  1:610824‑M1/40‑51 (MQ=255)
           tattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCa                                        <  1:2094858‑M1/13‑1 (MQ=255)
           tattccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCa                                        >  1:4833910‑M1/39‑51 (MQ=255)
           cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc                                        <  1:5173776‑M2/51‑11 (MQ=255)
           cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc                                        >  1:6668840‑M2/1‑41 (MQ=255)
           cACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacc                                        <  1:2905870‑M2/51‑11 (MQ=255)
            attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg                                       <  1:3150392‑M1/14‑1 (MQ=255)
            attccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAg                                       >  1:1129640‑M1/38‑51 (MQ=255)
            aCCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccc                                       >  1:1412517‑M2/1‑40 (MQ=255)
             ttccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGa                                      >  1:1008873‑M1/37‑51 (MQ=255)
             cccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccc                                      <  1:5933447‑M2/51‑13 (MQ=255)
              tccatttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGAt                                     <  1:1076161‑M1/16‑1 (MQ=255)
              ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca                                     <  1:4270818‑M2/51‑14 (MQ=255)
              ccATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgacccca                                     <  1:5745606‑M2/51‑14 (MQ=255)
               cATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaa                                    >  1:847194‑M2/1‑37 (MQ=255)
                catttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATcc                                   <  1:2278839‑M1/18‑1 (MQ=255)
                aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa                                   <  1:96677‑M2/51‑16 (MQ=255)
                aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa                                   <  1:1945723‑M2/51‑16 (MQ=255)
                aTGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaa                                   <  1:4151688‑M2/51‑16 (MQ=255)
                 tGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaa                                  <  1:4065665‑M2/51‑17 (MQ=255)
                  tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg                                 <  1:6143729‑M1/20‑1 (MQ=255)
                  tttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCgg                                 <  1:6980308‑M1/20‑1 (MQ=255)
                  gtagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaa                                 <  1:3877151‑M2/51‑18 (MQ=255)
                   ttcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCggg                                <  1:1905902‑M1/21‑1 (MQ=255)
                   tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag                                <  1:775988‑M2/51‑19 (MQ=255)
                   tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag                                >  1:5003448‑M2/1‑33 (MQ=255)
                   tagtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaag                                >  1:2514400‑M2/1‑33 (MQ=255)
                    tcatcgtccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGc                               <  1:6469016‑M1/22‑1 (MQ=255)
                    agtaAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagt                               >  1:4681205‑M2/1‑32 (MQ=255)
                      taAAGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttg                             >  1:1972323‑M2/1‑30 (MQ=255)
                        aaGCCCCAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttgga                           >  1:5146083‑M2/1‑28 (MQ=255)
                          tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca                         >  1:2733340‑M1/24‑51 (MQ=255)
                          tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca                         <  1:6687682‑M1/28‑1 (MQ=255)
                          tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca                         >  1:7098213‑M1/24‑51 (MQ=255)
                          tccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca                         <  1:4845549‑M1/28‑1 (MQ=255)
                          cccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCca                         <  1:2698521‑M1/28‑1 (MQ=255)
                           ccaacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcac                        >  1:4773657‑M1/23‑51 (MQ=255)
                            caacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCcaca                       >  1:4603609‑M1/22‑51 (MQ=255)
                             ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt                      >  1:6497430‑M2/1‑23 (MQ=255)
                             ccAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtt                      >  1:5129278‑M2/1‑23 (MQ=255)
                             aacaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACaa                      >  1:3079121‑M1/21‑51 (MQ=255)
                              cAGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagtta                     >  1:1220943‑M2/1‑22 (MQ=255)
                              acaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAAt                     <  1:1027280‑M1/32‑1 (MQ=255)
                              acaaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAAt                     <  1:6323105‑M1/32‑1 (MQ=255)
                               caaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATc                    <  1:3991994‑M1/33‑1 (MQ=255)
                               aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa                    <  1:6533694‑M2/51‑31 (MQ=255)
                               aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa                    >  1:1363347‑M2/1‑21 (MQ=255)
                               aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa                    >  1:3481866‑M2/1‑21 (MQ=255)
                               aGCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaa                    <  1:6409209‑M2/51‑31 (MQ=255)
                                gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa                   >  1:2649736‑M2/1‑20 (MQ=255)
                                gCTCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaa                   <  1:6173066‑M2/51‑32 (MQ=255)
                                aaaatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCt                   <  1:7065939‑M1/34‑1 (MQ=255)
                                  tCCCAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaaca                 <  1:5985214‑M2/51‑34 (MQ=255)
                                  aatgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTa                 <  1:1628969‑M1/36‑1 (MQ=255)
                                   cccAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacac                <  1:7145125‑M2/51‑35 (MQ=255)
                                    tgggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACa               <  1:5270584‑M1/38‑1 (MQ=255)
                                     gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt              <  1:4388059‑M1/39‑1 (MQ=255)
                                     gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt              >  1:2769846‑M1/13‑51 (MQ=255)
                                     gggtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAt              >  1:3211913‑M1/13‑51 (MQ=255)
                                     cAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacna              >  1:5169444‑M2/1‑15 (MQ=255)
                                     cAACTTTCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacga              <  1:2010120‑M2/51‑37 (MQ=255)
                                       gtgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgc            <  1:5773330‑M1/41‑1 (MQ=255)
                                        tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg           <  1:1872989‑M1/42‑1 (MQ=255)
                                        tgcagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATgcg           >  1:6375556‑M1/10‑51 (MQ=255)
                                          cagtacaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACAtgcgca         >  1:1475344‑M1/8‑50 (MQ=255)
                                           tCGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcata        >  1:1712472‑M2/1‑9 (MQ=255)
                                            cGCTGGTTtgtactggccccaaaaagttggacagttaaacacgaggcatat       <  1:1185236‑M2/51‑44 (MQ=255)
                                            cGCTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatat       <  1:6719600‑M2/51‑44 (MQ=255)
                                              cTGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag     >  1:2448208‑M2/1‑6 (MQ=255)
                                              acaGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACgg     >  1:448787‑M1/4‑51 (MQ=255)
                                               tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg    <  1:2482374‑M2/51‑47 (MQ=255)
                                               tGGTTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg    >  1:6103454‑M2/1‑5 (MQ=255)
                                                ggTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt   >  1:2164311‑M2/1‑4 (MQ=255)
                                                aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa   <  1:7215396‑M1/50‑1 (MQ=255)
                                                aGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCa   >  1:5660815‑M1/2‑51 (MQ=255)
                                                 gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg  >  1:3295144/1‑51 (MQ=255)
                                                 gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg  >  1:799529/1‑51 (MQ=255)
                                                 gtttctggtttcAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAg  <  1:6844583/51‑1 (MQ=255)
                                                 gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc  <  1:1762606‑M2/51‑49 (MQ=255)
                                                 gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc  <  1:3706796‑M2/51‑49 (MQ=255)
                                                 gTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc  >  1:5045679‑M2/1‑3 (MQ=255)
                                                 |                                                  
CCAGCCTTCTTCACCCATGTAGTAAAGCCCCAGCTCCCAACTTTCGCTGGTTTCTGGTTTCAGATCCGGGCTACCCACAATCTTACATGCGCCACGGCAG  >  REL606/2196607‑2196706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.