Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC JC | REL606 | 490,484 | IS150 (+) Δ1 bp :: +CATT | intergenic (‑37/+24) | ybbN ← / ← ybbO | predicted thioredoxin domain‑containing protein/short chain dehydrogenase |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 490484 | 490484 | 1 | 80 [0] | [0] 99 | ybbN/ybbO | predicted thioredoxin domain‑containing protein/short chain dehydrogenase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 490483 | 0 (0.000) | 80 (1.000) | 57/100 | 0.1 | 100% | intergenic (‑36/+25) | ybbN/ybbO | predicted thioredoxin domain‑containing protein/short chain dehydrogenase |
? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
* | ? | REL606 | 490485 = | 0 (0.000) | 91 (1.220) +AAT |
54/94 | 0.1 | 100% | intergenic (‑38/+23) | ybbN/ybbO | predicted thioredoxin domain‑containing protein/short chain dehydrogenase |
? | REL606 | = 590472 | NA (NA) | intergenic (+27/‑71) | insK‑1/hokE | IS150 putative transposase; b3558_1/toxic polypeptide, small |
TTTCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATGGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACG > REL606/490435‑490535 | cctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattg < 1:4892083‑M1/1‑1 (MQ=255) ctatatgcctcgtgtttaactgtccaactttttggggtcagtacacattgg > 1:2124492‑M1/50‑51 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacacattggg < 1:5796022‑M1/3‑1 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacacattgggg < 1:4269252‑M1/4‑1 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCt < 1:6102221‑M1/6‑1 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCtt > 1:4239035‑M1/45‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTa > 1:6398612‑M1/44‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTa > 1:2269535‑M1/44‑51 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTa > 1:2096949‑M1/44‑51 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTaa < 1:6821140‑M1/9‑1 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTaa > 1:5401252‑M1/43‑51 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTaa < 1:3672636‑M1/9‑1 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTaa > 1:1142591‑M1/43‑51 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAg < 1:1207700‑M1/10‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAg > 1:5934439‑M1/42‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgc < 1:2510701‑M1/11‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcg < 1:6863231‑M1/12‑1 (MQ=255) gtgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgc < 1:580195‑M1/13‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcg > 1:25967‑M1/38‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc > 1:1003660‑M1/37‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc > 1:6692189‑M1/37‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc > 1:4332795‑M1/37‑51 (MQ=255) gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc < 1:4487432‑M1/15‑1 (MQ=255) gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc < 1:367985‑M1/15‑1 (MQ=255) gtttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgc < 1:3779000‑M1/15‑1 (MQ=255) tttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgcg < 1:5437454‑M1/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcgcgcgc < 1:3896983‑M1/17‑1 (MQ=255) ttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcg > 1:6848452‑M1/35‑46 (MQ=255) ttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcg > 1:4495882‑M1/35‑46 (MQ=255) ttaactgtccaactttttggggtcagtacacattGGGGCTTAAgcg > 1:4895184‑M1/35‑46 (MQ=255) taactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCt < 1:2027046‑M1/18‑1 (MQ=255) aactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCtt > 1:431082‑M1/33‑51 (MQ=255) aactgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCtt < 1:2780657‑M1/19‑1 (MQ=255) actgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTc > 1:2301680‑M1/32‑51 (MQ=255) actgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTc > 1:6364666‑M1/32‑51 (MQ=255) actgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTc > 1:3099070‑M1/32‑51 (MQ=255) actgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTc > 1:1442235‑M1/32‑51 (MQ=255) ctgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCa < 1:2657139‑M1/21‑1 (MQ=255) tgtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCaa < 1:3155785‑M1/22‑1 (MQ=255) gtccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAAc < 1:1895223‑M1/23‑1 (MQ=255) tccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACt < 1:3635502‑M1/24‑1 (MQ=255) ccaactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTc > 1:3645430‑M1/27‑51 (MQ=255) caactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCa > 1:1932177‑M1/26‑51 (MQ=255) aactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAc < 1:5822169‑M1/27‑1 (MQ=255) aactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAc < 1:173204‑M1/27‑1 (MQ=255) aactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAc < 1:6938500‑M1/27‑1 (MQ=255) aactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAc < 1:6496282‑M1/27‑1 (MQ=255) aactttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAc < 1:4275553‑M1/27‑1 (MQ=255) ctttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAccc < 1:4758722‑M1/29‑1 (MQ=255) ctttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAccc < 1:7126378‑M1/29‑1 (MQ=255) tttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAcccc < 1:426337‑M1/30‑1 (MQ=255) tttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCAcccc < 1:6836304‑M1/30‑1 (MQ=255) ttttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCt < 1:2368012‑M1/31‑1 (MQ=255) tttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTg < 1:5640748‑M1/32‑1 (MQ=255) tttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTg < 1:6498329‑M1/32‑1 (MQ=255) tttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTg > 1:6473391‑M1/20‑51 (MQ=255) tttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTg > 1:1710227‑M1/20‑51 (MQ=255) tttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTg < 1:7153920‑M1/32‑1 (MQ=255) tttggggtcagtacacaatGGGGCTTAAGCGCGCGCTTCAACTCACCCCTg > 1:6885335‑M1/20‑51 (MQ=255) ttggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGc > 1:5788684‑M1/19‑51 (MQ=255) tggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCa > 1:4039342‑M1/18‑51 (MQ=255) tggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCa > 1:404386‑M1/18‑51 (MQ=255) ggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCaa > 1:4335306‑M1/17‑51 (MQ=255) ggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCaa < 1:1245550‑M1/35‑1 (MQ=255) ggggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCaa > 1:2018575‑M1/17‑51 (MQ=255) gggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAat > 1:1872016‑M1/16‑51 (MQ=255) gggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAat < 1:7160641‑M1/36‑1 (MQ=255) gggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAat < 1:2669388‑M1/36‑1 (MQ=255) ggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAata > 1:6180745‑M1/15‑51 (MQ=255) ggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAata > 1:5786429‑M1/15‑51 (MQ=255) ggtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAata > 1:1962137‑M1/15‑51 (MQ=255) gtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAatat > 1:2355436‑M1/14‑51 (MQ=255) gtcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAatat > 1:4807175‑M1/14‑51 (MQ=255) tcagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATAtt < 1:3106259‑M1/39‑1 (MQ=255) cagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATAttt < 1:3493785‑M1/40‑1 (MQ=255) cagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATAttt < 1:1988575‑M1/40‑1 (MQ=255) cagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATAttt > 1:564689‑M1/12‑51 (MQ=255) cagtacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATAttt < 1:5358736‑M1/40‑1 (MQ=255) tacacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGt < 1:1970334‑M1/43‑1 (MQ=255) acacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTc > 1:7255014‑M1/8‑51 (MQ=255) acacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTc > 1:4023743‑M1/8‑51 (MQ=255) acacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTc > 1:2828674‑M1/8‑51 (MQ=255) cacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTcc > 1:3965707‑M1/7‑51 (MQ=255) cacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTcc < 1:5021016‑M1/45‑1 (MQ=255) cacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTcc > 1:4006105‑M1/7‑51 (MQ=255) cacattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTcc > 1:6984962‑M1/7‑51 (MQ=255) acattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCa < 1:3726405‑M1/46‑1 (MQ=255) cattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt < 1:2498378‑M1/47‑1 (MQ=255) cattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt > 1:6203560‑M1/5‑51 (MQ=255) cattGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt < 1:3538462‑M1/47‑1 (MQ=255) cattGGGACTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCAt < 1:6600874‑M1/47‑1 (MQ=255) attGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATc > 1:2565287‑M1/4‑51 (MQ=255) attGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATc < 1:877003‑M1/48‑1 (MQ=255) attGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATc < 1:5105398‑M1/48‑1 (MQ=255) ttGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCa < 1:7079269‑M1/49‑1 (MQ=255) ttGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCa > 1:5554917‑M1/3‑51 (MQ=255) ttGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCa > 1:3242664‑M1/3‑51 (MQ=255) ggggCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCAcg < 1:4942657/51‑1 (MQ=255) ggggCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCAcg > 1:6211273/1‑51 (MQ=255) | TTTCTACGGACATGGAGTCGCTCTCTGTTGTCGATATTTTCTTTGACATGGGGGCTTAAGCGCGCGCTTCAACTCACCCCTGCAATATTTTGTCCATCACG > REL606/490435‑490535 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |