| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 3,482,398 | Δ25 bp | coding (714‑738/2706 nt) | malT → | transcriptional regulator MalT |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3482398 | 3482422 | 25 | 86 [0] | [0] 87 | malT | transcriptional regulator MalT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3482397 | 0 (0.000) | 86 (1.080) | 56/100 | 0.1 | 100% | coding (713/2706 nt) | malT | transcriptional regulator MalT |
| ? | REL606 | 3482423 = | 0 (0.000) | coding (739/2706 nt) | malT | transcriptional regulator MalT | |||||
CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3482348‑3482397‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT > REL606/3482423‑3482472 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:6674529/51‑1CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:6715266/51‑1CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA > 1:3711632/1‑51CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:4074017/51‑1CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:3443775/51‑1 TACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAA > 1:5574620/1‑51 TACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAA < 1:3545570/51‑1 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:96909/51‑1 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT > 1:3089801/1‑51 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:6197904/51‑1 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:3090495/51‑1 ACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAAT < 1:4795578/51‑1 CTAATTGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA > 1:4659355/1‑51 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA < 1:1823080/51‑1 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA < 1:5461121/51‑1 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCA < 1:500067/51‑1 AATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGC < 1:1688997/51‑1 TCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCA < 1:3203014/51‑1 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT > 1:1204110/1‑51 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT < 1:5620988/51‑1 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT < 1:4817858/51‑1 CGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCAT < 1:5423310/51‑1 GCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATC < 1:4166070/51‑1 GCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATC > 1:4023598/1‑51 CCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTT < 1:2022854/51‑1 CCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTT > 1:1587024/1‑51 CCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTT < 1:127474/51‑1 CTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTT < 1:1008253/51‑1 CTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTT < 1:3911900/51‑1 CTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTT < 1:1352796/51‑1 TCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTC < 1:998384/51‑1 TCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTC > 1:6962591/1‑51 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:5443816/51‑1 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:5536470/51‑1 CTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCG < 1:922148/51‑1 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG > 1:4300491/1‑51 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG > 1:2487315/1‑51 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG > 1:6798550/1‑51 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG < 1:79259/51‑1 TCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGG < 1:5179512/51‑1 CGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGAT > 1:1685605/1‑51 CCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTA > 1:100767/1‑51 CCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTA < 1:7108401/51‑1 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT > 1:6525783/1‑51 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT < 1:935489/51‑1 CCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTAT > 1:3392860/1‑51 CGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATC > 1:1898042/1‑51 GGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCT < 1:2279443/51‑1 GCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTG > 1:4706819/1‑51 CAGAATACCCACTCAGCCCATAAAATGCCAGCTATCTTTCGGATTATCTGG > 1:2610674/1‑51 AGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGT < 1:1138229/51‑1 AGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGT > 1:5653263/1‑51 ATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGA < 1:4027169/51‑1 ATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGA < 1:6281906/51‑1 TACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGAT < 1:6589388/51‑1 ACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATG > 1:2617190/1‑51 CCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATNA < 1:1983335/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:6946101/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:2902981/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:1281165/51‑1 CCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG > 1:4857404/1‑51 CACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGG < 1:5673844/51‑1 CTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAG < 1:4470921/48‑1 CAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTT < 1:536316/51‑1 AGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTG > 1:1928/1‑51 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG > 1:864930/1‑51 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG < 1:3555017/51‑1 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG < 1:2045379/51‑1 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGG < 1:2435073/51‑1 CCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGA > 1:4595542/1‑51 CCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGA < 1:3255170/51‑1 CCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGAT > 1:137687/1‑51 CCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGAT < 1:3283383/51‑1 CATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATA < 1:5505325/51‑1 CATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATA < 1:3491434/51‑1 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA < 1:4151773/51‑1 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA > 1:6741041/1‑51 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA < 1:6548572/51‑1 ATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAA > 1:3660536/1‑51 TAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAAC < 1:3154690/51‑1 TAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAAC < 1:5742136/51‑1 AAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACG < 1:6773584/51‑1 AAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACG > 1:3398469/1‑51 AAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACG < 1:386761/51‑1 AAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT < 1:5472493/51‑1 AAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT > 1:1072688/1‑51 CTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3482348‑3482397‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT > REL606/3482423‑3482472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |