| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,619,834 | IS150 (–) +3 bp | intergenic (‑71/+139) | hokD ← / ← ECB_01533 | small toxic polypeptide/conserved hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 69 (0.900) | 50/96 | 0.2 | 98.5% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1619834 = | 1 (0.010) | intergenic (‑71/+141) | hokD/ECB_01533 | small toxic polypeptide/conserved hypothetical protein | |||||
| * | ? | REL606 | = 666130 | NA (NA) | 55 (0.700) | 41/98 | 0.8 | 98.1% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1619836 | 1 (0.010) | intergenic (‑73/+139) | hokD/ECB_01533 | small toxic polypeptide/conserved hypothetical protein | |||||
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666084‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGTGC < REL606/1619836‑1619787 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCT > 1:2240948/1‑51 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGA < 1:23054/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGA > 1:1373116/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAG > 1:4368642/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAG > 1:507150/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGG > 1:3110213/1‑51 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCA < 1:4391285/51‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCA > 1:595021/1‑51 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCA < 1:1167224/51‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAA < 1:893958/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCA < 1:294116/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCA > 1:2344375/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCA < 1:2072990/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCAT < 1:3559760/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCAT < 1:3852813/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCAT > 1:2877490/1‑51 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCAT < 1:7255354/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCAT < 1:6108924/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATG < 1:6236292/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCT > 1:3714927/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTC < 1:4816583/46‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTA > 1:1004555/1‑51 TAACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTA < 1:4792050/51‑1 AACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAG > 1:2016978/1‑51 ACTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGA < 1:3429085/51‑1 CTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGAC > 1:1546594/1‑51 CTGTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGAC < 1:643142/51‑1 GTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACAC < 1:1812606/51‑1 GTCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACAC > 1:3258502/1‑51 TCCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACA < 1:5295488/51‑1 CCAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACAT < 1:2764976/51‑1 CAACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATG < 1:4072633/51‑1 AACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGT > 1:960686/1‑51 AACTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGT > 1:4376533/1‑51 CTTTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAG < 1:1599320/51‑1 TTTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGT > 1:202334/1‑51 cTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTT > 1:5336098/2‑51 TTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTT < 1:3816440/51‑1 TTTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGNT < 1:1402841/51‑1 TTGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTA < 1:2261414/51‑1 TGGGGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAG < 1:4357701/51‑1 GGTCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCT < 1:4880487/51‑1 TCAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCT < 1:643350/51‑1 CAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTT > 1:1812429/1‑51 CAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTT < 1:2021877/51‑1 CAGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTT < 1:4726845/51‑1 AGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTA < 1:6413200/51‑1 AGTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTA < 1:979821/51‑1 GTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTAC > 1:979922/1‑51 GTACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTAC < 1:2207637/51‑1 ACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGT < 1:527311/51‑1 ACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGT < 1:160966/51‑1 ACAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGT < 1:4497626/51‑1 CAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGTG < 1:19320/51‑1 CAATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGTG < 1:1209593/51‑1 AATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGTGC < 1:2623591/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666084‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aATCTGAGGCCAATTTCATGCTAGACACATGTAGGTTAGCCTCTTACGTGC < REL606/1619836‑1619787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |